Gene Acel_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1676 
Symbol 
ID4486033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1885554 
End bp1886543 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content66% 
IMG OID639730465 
ProductUDP-galactose 4-epimerase 
Protein accessionYP_873434 
Protein GI117928883 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000240695 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGTCC TCGTCACCGG AGGCGCCGGC TATATCGGCA GTGTCGTCAC GCGCGTGCTC 
ATCGAGGACG GGCACGACGT CGTCGTCCTC GACGACCTCT CCACCGGTCA TCGTGACGCC
GTACCGGCGG GCGTGCCGTT CGTTCATGCC GACATCGCGG ACGCGGGCGA CGTCCTGGCC
CGCGAGCCGT TCGATGGCGT CCTGCATTTT GCGGCGAAAT CGCTCGTCGG AGAATCCATG
AACAGACCGG AGTTGTACTG GGCAACGAAT GTCTGCGGCA CCCGGCACCT GCTGGACGCC
ATGCGGCGTC ACAGCGTTCC CCGGCTCATC TTTTCGTCAA CCGCCGCGGT GTACGGCGAG
GGCGGCCCCG ACGGCATCGG TGAGGACACG CCTCCCCGGC CGACAAGCCC CTATGGGACG
TCGAAACTCG CCGTTGACCT GATGATTTCC GATGAGTGTC GGGCATATCC GCTGGGTGCG
GTGAGTTTGC GGTACTTCAA CGTCGCCGGA GCGTACGGAC CATGCGGCGA GCGGCACCGC
ACGGAAACTC ATCTCATTCC CATCACGCTC GATGTCGCCG CCGGCCGCCG TCCGCACTTG
GAAATTTACG GAAACGATTG GCCGACCCCC GACGGTACGT GCATGCGGGA TTACATCCAC
GTCCTCGACC TGGCGCGTGC CCACGTCGTC GCGTTGCAGC ACGCCCGTCC GGGACACCAT
GCCATCTACA ACCTCGGCAA CGGCCGAGGT TTCTCGGTCC GGGAGGTCGT CGCTGCCGTC
GAACGGGTCA CCGGACGGCG TGTGCCCGTC ACCGTCGCAC CACGTCGACC GGGTGATCCC
GCCTGGCTGG TCGCCGACGA TTCCCGGGCC CGCGCGGAAT TGAACTGGCA ACCACAGGCC
GATTTGGACA CGATCATTGC GGACGCGTGG GCGTTTCATC AACAACGCCG GCACACCGAC
GGACTGGCAG GCGGGGGGAC GACGTCGTGA
 
Protein sequence
MKVLVTGGAG YIGSVVTRVL IEDGHDVVVL DDLSTGHRDA VPAGVPFVHA DIADAGDVLA 
REPFDGVLHF AAKSLVGESM NRPELYWATN VCGTRHLLDA MRRHSVPRLI FSSTAAVYGE
GGPDGIGEDT PPRPTSPYGT SKLAVDLMIS DECRAYPLGA VSLRYFNVAG AYGPCGERHR
TETHLIPITL DVAAGRRPHL EIYGNDWPTP DGTCMRDYIH VLDLARAHVV ALQHARPGHH
AIYNLGNGRG FSVREVVAAV ERVTGRRVPV TVAPRRPGDP AWLVADDSRA RAELNWQPQA
DLDTIIADAW AFHQQRRHTD GLAGGGTTS