Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1673 |
Symbol | |
ID | 4485258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1881504 |
End bp | 1883096 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639730462 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_873431 |
Protein GI | 117928880 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.472299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00171027 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGAATCC GACAGCTCTT GCCGTCCACG CTCGCGGGGC GGGACGCCGT TCACCGCCGC GGTCTTGGAC TCGCGGCGGT CTGTACGCTG CTCTTCCTCA CCTTTCTGGA CAACACGATC GTCAGCGTGG CGCTTGGTGA TATTCAGCAG CGGTTGTCCG CCGGGGTGCA GTCCCTGCAG TGGGTGGTGA ACGCCTATGC GTTGACCTTC GCGTCCGCGA TGCTGCTCGC CGGCGCCTTG GGGGACCGGG TCGGCGAACG GAAAGTGATG TTCAGCGGCG CCGCGGTCTT CTGCATCGGC TCAGTGATCT GTGCGGTTGC TCCGGACACG TCAGTTCTGA TTGCCGGCCG GGGTGTCATG GGGATCGGTG CCGCAGCGTC GGAACCCGGC ACCTTGGCGA TGATCCGGTA TTTGTTTCCG GGACGCCGGG AACGAGCTCG GGCGACGGGA GTCTGGGCCG GTGTCTCTGG GCTCGCGCTC GCCCTCGGGC CGGTCATCGG CGGCATCATC GTTGGACTAT CCAGCTGGCG CTGGATTTTC TGGTTCAACC TCGCCTTCGG TGTCGCCGCT CTTGCCATTG CGGCGATTGT GGTGCCGGAG ACGCCGCGGG TACCGAGCCG GCGCATCGAC CTTGTCGGCG GTCTTCTGGG CGCCGGAAGT CTCGCTCTCC TCGTCTTCGG GGTTCTGCGT GGGGAACTCG ACGGCTTCGG CGCGGCGCAC GTCATAAGCC TGCTCGTCGC GTCCGTCGTC GTCGGTCTCG TCTTCTTGTG GTGGCAATTC CACGCCTCTG AGCCGTTGAT TCCCCCGCAG TTCCTGCGGA TGCCGGCCTT TGTCGTTCCG AATATCGTCG CCTTCGCCAC GTATTTCGGG ACGTTTGCCG TCTTCTTCTT CGCCGCCTTG TATCTCAACA TCGTCGTCGG ATTCAGCGGC TTGCGCATCG CGTTGCAGTT CATCCCCATG ATGGTCATCA TGATCGCGGC GTCCGTGCTG ACCGGGCGAT GGATCGGGCG GACCGGTGCT CGTCGCCCTG TGGTCCTCGG ATGCGGCGTC TTCACCCTGG GACTGCTCCT CACCGACGGG GCGCTGACCC GCCACCCGCA TTACCTTCCG CTCGCGGCAT CGTTGGCCCT TGCCGGGCTC GGTATCGGAA TCACCGTGGT GCCGACGGCT TTTGCCGCAA TGAGTGCCGT GCCTGTCGAT CGCGCCGGTG TCGCCAGTTC GGCGGTGAAT ACCAGCCGGG AGATCGGCGC CGTCGTGGGA ACGGCGGTTC TCGGAGCCAT CGTGAATTCA GCGTTGATTT CTCACGCGAC GTCGACGCTC AATGCACTCG GCTGGTCGAA ACTCAAGGGC TTCGTTACCT CGGCGATTCT CAACGGCGGC GCATCCCTCG GCGGTCCGCT CGGCCAGGCG TCACCAGAGA TTCAGAAACT CGTCAATGCG TTGTATGACG CGTTCGCCGA AGGGTTACAC ATTGCGCTGG TGCTCTCCGC ATGTCTCGTG TTGGCCGCCG GCGTGCTTGC CGCCTCGGTG CGTGGCCCGC GCCTGGCCGA ATCCGAGGAG ACGGCCCTCG GGCACGTGCA TCTGCCGTCT TAG
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Protein sequence | MRIRQLLPST LAGRDAVHRR GLGLAAVCTL LFLTFLDNTI VSVALGDIQQ RLSAGVQSLQ WVVNAYALTF ASAMLLAGAL GDRVGERKVM FSGAAVFCIG SVICAVAPDT SVLIAGRGVM GIGAAASEPG TLAMIRYLFP GRRERARATG VWAGVSGLAL ALGPVIGGII VGLSSWRWIF WFNLAFGVAA LAIAAIVVPE TPRVPSRRID LVGGLLGAGS LALLVFGVLR GELDGFGAAH VISLLVASVV VGLVFLWWQF HASEPLIPPQ FLRMPAFVVP NIVAFATYFG TFAVFFFAAL YLNIVVGFSG LRIALQFIPM MVIMIAASVL TGRWIGRTGA RRPVVLGCGV FTLGLLLTDG ALTRHPHYLP LAASLALAGL GIGITVVPTA FAAMSAVPVD RAGVASSAVN TSREIGAVVG TAVLGAIVNS ALISHATSTL NALGWSKLKG FVTSAILNGG ASLGGPLGQA SPEIQKLVNA LYDAFAEGLH IALVLSACLV LAAGVLAASV RGPRLAESEE TALGHVHLPS
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