| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1662 |
|---|
| Symbol | |
|---|
| ID | 4485247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 1870219 |
|---|
| End bp | 1871571 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639730451 |
|---|
| Product | diguanylate cyclase/phosphodiesterase |
|---|
| Protein accession | YP_873420 |
|---|
| Protein GI | 117928869 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.235348 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCGAC GGCTGCGCAC CGAGGTGGCC CGGAACGCCT ACCAGGCGCG GCACGACGCA
CTGACCGGCC TCCCCAACCG AGCCGCGTTC CAGCGCAGCG GCGAAGCCGC CGTAGCACGC
GCGGTCTCCC GGCGCCTCGG GGTGCGCCGG GAAGGCACGA CGGCCGTCGC GGTCATTGAT
CTGGACCGGT TCAAGGCGAT CAACGACACT CTCGGGCCCC GCAACGGTGA CGTCCTGCTT
CGACGGATCG CCGAACGGTT GGCGAGCCAT ACCCGAAAAG GTGACACGGT GGCGCGGCTC
GGTGGTGATG AGTTCGGCCT CATCCTGCGT GACACCGCGG ACCCGCACGA CGCGTTGTGC
CGTATCCGCG GGCTCATCGA GAGTGAACTC GACGTCGCCG GCATCCCCCT CGCTGTCGAA
GCGAGCATCG GCTACGCCGT CACCCCGGAC GACGCCGCCA CGATCGAGGA ATTGCTGCAG
TACGCGGATG TCGCCGTGCA CCACGCCAAG GCGCGGCACC TGGGCGTCGT CCGGTACCAC
CCGTCGCAGA ATCACTACGA CGCCGCCAGT CTGAGTCTCA TCAGCGAATT CCGTCGCGCC
GTCACGGACA ATCAGCTGGT TCTCCACTAT CAACCCAAGG CGAAATTGTC GGACGGCGCC
GTCGAGGCCA TTGAGGCGTT GGTGCGCTGG CACCATCCGG CGCGCGGCCT GCTCTATCCG
GACGTGTTTG TGCCGCTGGT CGAACAGACC GACCTCATCG ACGATCTGAC TCGTTGGGTG
TTGCGGCACG CTCTGGAGGA CCTCGCCACC ATCGGTGACC CGCACCTGGC CGTCGCCGTC
AACATCTCGG CGCGTAATCT TAGCCGCCAC ACCTTTGCCG CGGACGTCAA AGCCGCCGTC
CGCCGCGCCG GTATCGAACC GCACCGGCTG GTTCTCGAAC TCACCGAAAC GGCATTGCTG
TTCGACCCGA CGCGGGCCCA CGACGTCTTC ACCGACCTCA CGTCATACGG AATCCGGGTG
AGCATTGACG ATTTCGGTCG CGGCCAGACG TCGCTGGGTT ACCTGTCGGC GCTGCCGCTC
TCCGAAATAA AGATTGATCG GACATTTGTC CGGGACATGG TGACGAACGC GGCACATGCC
GCCATCGTGC GATCAGTCGT GGAACTTGGC CACAATCTGG GCCTGATCGT CGTAGCGGAG
GGCGTCGAGA CCGCCGAGGT CGGCGACGAG CTCCGCGAGT GCGGCTGCGA CGTCGCGCAG
GGGTACTGGT TCGCCCGGCC GATGCCGCTC GTTGACCTCC GGCGGTGGCT CGCCGGCAGC
GATAGGGGTG ACTTTTCGCT CGCCCAGCTG TAG
|
|---|
| Protein sequence | MTRRLRTEVA RNAYQARHDA LTGLPNRAAF QRSGEAAVAR AVSRRLGVRR EGTTAVAVID
LDRFKAINDT LGPRNGDVLL RRIAERLASH TRKGDTVARL GGDEFGLILR DTADPHDALC
RIRGLIESEL DVAGIPLAVE ASIGYAVTPD DAATIEELLQ YADVAVHHAK ARHLGVVRYH
PSQNHYDAAS LSLISEFRRA VTDNQLVLHY QPKAKLSDGA VEAIEALVRW HHPARGLLYP
DVFVPLVEQT DLIDDLTRWV LRHALEDLAT IGDPHLAVAV NISARNLSRH TFAADVKAAV
RRAGIEPHRL VLELTETALL FDPTRAHDVF TDLTSYGIRV SIDDFGRGQT SLGYLSALPL
SEIKIDRTFV RDMVTNAAHA AIVRSVVELG HNLGLIVVAE GVETAEVGDE LRECGCDVAQ
GYWFARPMPL VDLRRWLAGS DRGDFSLAQL
|
|---|
| |