| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1657 |
|---|
| Symbol | |
|---|
| ID | 4486712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 1863750 |
|---|
| End bp | 1864670 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639730446 |
|---|
| Product | 2,3-dimethylmalate lyase |
|---|
| Protein accession | YP_873415 |
|---|
| Protein GI | 117928864 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.106264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.68628 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACACCGA CGTCCGCGGC CGCCGATTTC CGGGCGAAGC TCACGAGCGG CCGCTTGCTC
CGATTCCCCG GCGCCATCAA TCCGCTGTCC GCGGTCCTCA TTGAGGAGCT GCGATTTGAC
GGGGTGTACG TCTCAGGCGC CGTCGTCGCT GCGGATTTGG CCCTGCCGGA CATCGGCCTG
ACGACGCTGA CCGAAGTCGT GAATCGAGCC GAGCAGATCG CCCGGGTGAC ACGCCTCCCG
GTGCTCGTTG ACGCCGACAC CGGTTTCGGC GGTCCGGTGA ACATCGCCCG GACCGTCCAG
CTGCTCACCC GCGCGGGTGT CGCCGGTTGT CACATCGAAG ACCAGCAACA CCCGAAACGC
TGCGGCCACC TGGAGGGCAA GACACTTGTC ACCGTAACGG AAATGCTCCA GCGCATCCGC
GCGGCCGTGA CCGCGCGTCC CGACCCCGAC TTCGTCATTT GTGCGCGCAC CGATGCCCGC
ACCGTCGAGG GGCTCGATGC CGCGATCGAT CGGGCGAAGG CATATGTTGA CGCGGGAGCC
GACCTCATCT TCGCGGAAGC CCTCGCGGAC GAAGCGGAAA TCGCCCGGTT TCGGGCGGCG
GTCGACGCGC CGCTTCTCAT CAACATGACG GAATTCGGCC GCACCACCCT GCTCCCCGCC
TCCACTCTGG CCACTCTTGG TGTCAATGTC GTCATCTACC CGGTGACACT CTTCCGGGTC
GCGATGGGAG CCGTGGAACG CGCGCTCGCC ACGATCGCGG CGGAAGGAAC GCAGATGTCG
TTGCTGGAGG GCATGCAGAC CCGGCAGCGG CTGTACGAAT TGGTCCGTTA CCGCGACTAT
GCCGCTTTTG ACGCCGACAT TTACACGTTT ACGACGCCAA CCACCACCCC GACGGCGGAG
AGCGATTCCG ATGACCAGTG A
|
|---|
| Protein sequence | MTPTSAAADF RAKLTSGRLL RFPGAINPLS AVLIEELRFD GVYVSGAVVA ADLALPDIGL
TTLTEVVNRA EQIARVTRLP VLVDADTGFG GPVNIARTVQ LLTRAGVAGC HIEDQQHPKR
CGHLEGKTLV TVTEMLQRIR AAVTARPDPD FVICARTDAR TVEGLDAAID RAKAYVDAGA
DLIFAEALAD EAEIARFRAA VDAPLLINMT EFGRTTLLPA STLATLGVNV VIYPVTLFRV
AMGAVERALA TIAAEGTQMS LLEGMQTRQR LYELVRYRDY AAFDADIYTF TTPTTTPTAE
SDSDDQ
|
|---|
| |