Gene Acel_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1626 
Symbol 
ID4485040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1827605 
End bp1828294 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content63% 
IMG OID639730413 
ProductABC transporter related 
Protein accessionYP_873384 
Protein GI117928833 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA TTTACCGGCT CGTCGATGTC TGCTTGACGT ACGCCGCGCA CCCTCCGGTG 
CATGCCGTGC GCAACTGCAC ACTCGACATC CATAGAGGTG AATTCGTCGC GATCTGCGGA
ACCTCCGGCT CGGGTAAATC CAGCCTGCTC AATCTCCTCG GCCTTATTGA CCGGCCGACA
TCTGGTGAGA TTTACTTCCG CGACACAGCC GTCGCGGCAT TGAAGGACCA CCAGTTGACG
GCGCTTCGCC GACACTCGAT CGGCTTTGTC TTTCAGGCGT TCCACCTTAT TCCCCATCGG
ACGGTCGTGG ATAACGTCTG CCTCCCGATG GTGTACGCCG GCGTACCCCG ACGAGAACGG
CGCGCCCGCG CCCTCGACGC GCTCCGCACC GTCGGGCTCC TCGACCGGGC ATGGGCTCAA
CCACAGACCC TCTCCGGGGG TGAAGCACAG CGTGTCGCCA TCGCGCGCGC CCTCGTCACC
GCGCCGGACG TCATCCTCTG CGACGAACCG ACCGGTAATC TTGACAGCGC GAACGCCGCA
AATGTCATCG ACGCATTACG TGCACTCAAC AACGACAACC AGACCATCGT GCTCGTGACG
CACGATCAGA ACATCGCGCG TGCCGCCCGG CGCATCGTCA GGGTGCGCGA CGGCGTGGTC
AGCGAGACAA CGCATCCCGA CGCAGCGTGA
 
Protein sequence
MSVIYRLVDV CLTYAAHPPV HAVRNCTLDI HRGEFVAICG TSGSGKSSLL NLLGLIDRPT 
SGEIYFRDTA VAALKDHQLT ALRRHSIGFV FQAFHLIPHR TVVDNVCLPM VYAGVPRRER
RARALDALRT VGLLDRAWAQ PQTLSGGEAQ RVAIARALVT APDVILCDEP TGNLDSANAA
NVIDALRALN NDNQTIVLVT HDQNIARAAR RIVRVRDGVV SETTHPDAA