Gene Acel_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1598 
Symbol 
ID4484653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1798733 
End bp1799215 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content67% 
IMG OID639730384 
Productribose-5-phosphate isomerase B 
Protein accessionYP_873356 
Protein GI117928805 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR02133] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.113376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.826061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGTCT ACGTTGCCTC GGATCACGCC GGGTTCGAGC TGAAGACACG CCTGATCGAA 
TGGCTCGCTG AGCAGGGCTA CGAGCCGGTC GACTGCGGCC CGGTCGTCTT CCAACCGGAC
GACGACTATC CGCCGTACGT GATCGATGCG GCGCGGCGGA CGGCCGCCGA CCGGGACAGC
TTCGGTGTCG TGATCGGGGG ATCCGGCAAT GGCGAGCAGA TCGCGGCGAA CAAGGTCCGG
GGCATCCGCG CCGCGTTGAT CTGGAATGAC GAGACCGCGG CGCTGGCTCG AGCCCACAAT
GACGCCAACG TGGCAAGCAT CGGCGCCCGG CAGCACACCA TTCGTGACGC GATCCGGTTG
GTGGACATCT TCCTCCGCAC CCCGTTCTCC GGGGAACCCC GGCATGCGCG GCGGATCGGC
ATGATCAGCG AGTTCGAGGC GACCGGCACA CCCCCGGAGG TTCCGACAGT CGACTGGCGC
TGA
 
Protein sequence
MRVYVASDHA GFELKTRLIE WLAEQGYEPV DCGPVVFQPD DDYPPYVIDA ARRTAADRDS 
FGVVIGGSGN GEQIAANKVR GIRAALIWND ETAALARAHN DANVASIGAR QHTIRDAIRL
VDIFLRTPFS GEPRHARRIG MISEFEATGT PPEVPTVDWR