Gene Acel_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1597 
Symbol 
ID4484652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1797192 
End bp1798316 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content71% 
IMG OID639730383 
Productserine phosphatase 
Protein accessionYP_873355 
Protein GI117928804 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0929123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.95677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCGG CTGACCGGTC TCGCGTCGGC CGATCCCGGC CACTGTCCCG GCGGGGTTTG 
CGGCGCCGTA CGATCCGCAT CGCCCTGCGC CGCAGCTCCG TACTCGAACC GCGGATCGCG
CGGTTCTGGC TCGGTGCGCT GATCGTCGGA CTGGGGATTC TGTCACCGAT CCTCGGCGTG
GCCTGGCTGC CGGCGGCGGT GTTTGTCGTG CCATTGCTGG GCTCGGCGCT GCTGTTGCCT
CGGCGCAGTG TCATCGCGAT GGTGGCGCTG ACGCTCGCCG CCCTCGGCTA TGACGTCGGC
CGGCTTGGCA TGCGCACGCT GCGGCCGGGG GAGCTCGTGG TCGTCGGTCT GGTGGCGGTC
GTCGCCTATC AGCTCGCGGC GACCCGCGAG CGGCTCGGCG TCCAGGGCCT GCGGGGCGAA
GCGATGCTCG TCGACCTGCG CGATCGGCTG CGACGGCTCG GGGAGCTGCC CGCGCTGCCG
GCGGGCTGGC ATGCCGAGGC GTCGGTACGG TCCGCAGGAC CGACGTCGTT CGGTGGGGAT
TTCCTCGTCG CGGCTTTAAC CGGTGACGGG AGCCGGCTTG AGGTGGTACT GGTCGACGTG
TCCGGCAAAG GGGTGGACGC CGCCACCCGA GCCCTCTCGC TGGCGGGCGC CTTCGGCGGG
TTGCTCGGCG CGGTCGCCCC GGACCGGTTT CTCTCGGCAG CGAACGCCTA TTTGCTCCGC
CAGAGTTGGC CGGAAGGGTT CGCGACCGCG GTTCACCTCG CGCTGGATGT GCACACCGGG
GCGTACACCG TGCGGTCGGC GGGTCATCCG CCGGCGGTGC ACTTCCGGTC CGGCAGCGGG
ACCTGGCAGT TGGCCGATGC CGCAGGCGCG ATTCTCGGCG TGCTGCCCGG CCCGGAATTT
GCGCCGGTGC ATGGCACCCT CGAGCCGGGT GACGCGATAT TGCTGTACAC CGACGGGCTG
GTCGAGACCC CGGAGCGGGA GATCAGCGTC GGCATCGACA AGTTGCTCGG CGAGGCGGAG
CGGCTGGTCA CCCGAGGCTT CCGCGGGGGA ACGGAGTGGC TGCTCGAAAC CGTCGCCCCA
GCGGGCAGCG ATGATCAAGC ACTCATCATC ATCTGGCGTG ACTGA
 
Protein sequence
MAAADRSRVG RSRPLSRRGL RRRTIRIALR RSSVLEPRIA RFWLGALIVG LGILSPILGV 
AWLPAAVFVV PLLGSALLLP RRSVIAMVAL TLAALGYDVG RLGMRTLRPG ELVVVGLVAV
VAYQLAATRE RLGVQGLRGE AMLVDLRDRL RRLGELPALP AGWHAEASVR SAGPTSFGGD
FLVAALTGDG SRLEVVLVDV SGKGVDAATR ALSLAGAFGG LLGAVAPDRF LSAANAYLLR
QSWPEGFATA VHLALDVHTG AYTVRSAGHP PAVHFRSGSG TWQLADAAGA ILGVLPGPEF
APVHGTLEPG DAILLYTDGL VETPEREISV GIDKLLGEAE RLVTRGFRGG TEWLLETVAP
AGSDDQALII IWRD