Gene Acel_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1573 
Symbol 
ID4485473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1774310 
End bp1775164 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content66% 
IMG OID639730357 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_873331 
Protein GI117928780 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0779267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGC TTCCAGAGGT CGAGACGATC CGCCGCGGTC TGGCTCGGCA CCTGGTGGGA 
CGCCGCATCG GGTACGCCGA GGTGTTTCAT CCGCGCGCGG TACGGCGGCA TTCCGGCGGG
GCGGCGGATT TCACCGGCCG GCTGATCGGA CGGCGTATTC AGGCGGTCTT GCGGCGCGGA
AAGTATCTGT GGTTCGCTTT GGATTCCGAT CTCGCGCTTC TCGCGCATCT GGGCATGAGC
GGCCAATTTC TCCTCGCCGA TGCGGCGAGT CCGTCGCCGA AGCATCTGCG GGCTCGGTTT
GCTTTCACCG ACGGGGATCC TGAGCTGCGG TTCGTGGACC AGCGGACGTT CGGCGGACTC
ACCCTCGCGC CCCTCATCGC GGATGTGCCG GCGAGCATCA GCCACATTGC GCCGGATATC
CTCGACGTGG CTTTTGATGA GGCGGAGTTC CACCGCAGAT TCACCCAGCG GCGCACGGGT
GTCAAACGTG CACTCCTTGA CCAAACACTT ATTTCCGGCG TCGGGAATAT TTACGCCGAC
GAAGCACTAT GGCGCGCGCG GCTGCATTAC GCGACCCCGA CCGTCGACAT CTCGGCGGCG
ACCTGCCGGC GGCTGCTCGC GGCGTTACGT GCGGTATTCC GTGCTGCGCT GCGCGCCGGC
GGTACGTCGT TCGACGCGTT GTACGTCAAT GTCAACGGGC AGAGCGGTTT CTTCGACCGG
TCGTTGGCGG TCTACGGCCG GGCGGGTCAG CCGTGCCGGC GGTGTGGGAC GGCGATCGTG
CGGGAGCCAT TCATGAACCG TTCGTCCTTT CGGTGTCCGG CATGTCAGCC CGTGCCGAGG
CGGCCACACT GGTAA
 
Protein sequence
MPELPEVETI RRGLARHLVG RRIGYAEVFH PRAVRRHSGG AADFTGRLIG RRIQAVLRRG 
KYLWFALDSD LALLAHLGMS GQFLLADAAS PSPKHLRARF AFTDGDPELR FVDQRTFGGL
TLAPLIADVP ASISHIAPDI LDVAFDEAEF HRRFTQRRTG VKRALLDQTL ISGVGNIYAD
EALWRARLHY ATPTVDISAA TCRRLLAALR AVFRAALRAG GTSFDALYVN VNGQSGFFDR
SLAVYGRAGQ PCRRCGTAIV REPFMNRSSF RCPACQPVPR RPHW