Gene Acel_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1570 
Symbol 
ID4485470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1769566 
End bp1773132 
Gene Length3567 bp 
Protein Length1188 aa 
Translation table11 
GC content69% 
IMG OID639730354 
Productcondensin subunit Smc 
Protein accessionYP_873328 
Protein GI117928777 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.069704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATCTGA AGAGCCTCAC GCTGCGCGGC TTCAAGTCTT TTGCGTCCAC AACCACCTTG 
CGCTTCGAAC CGGGCATCAC CTGTGTCGTC GGACCCAATG GGTCCGGCAA ATCCAACATC
GTTGACGCGC TGGCGTGGGT GATGGGTGAG CAGGGGGCGA AGAGCCTCCG CGGCGGCAAG
ATGGAGGACG TGATCTTTGC GGGGACGGCG TCCCGTCCGC CGCTGGGCCG GGCCGAGGTC
GTCGTCACCA TCGACAATTC CGACGGTGCG CTGCCTATTG AGTACTCCGA AGTCACCCTC
AGCCGGATCA TGTTCCGGAA CGGTGGCTCG GAGTACGCCA TCAACGGCCG TCCCTGCCGG
CTGCTCGATA TTCAAGAGCT CCTCTCGGAT TCCGGCATCG GCCGGGAGAT GCACGTGATC
GTCGGGCAGG GGCAGCTCGA GGAGGTCCTG CACGCCACCC CGGAAGAACG ACGCGGCTTC
ATCGAGGAGG CCGCCGGAGT CCTCAAACAC CGCAAGCGCA AAGAAAAGGC CCTGCGCAAG
CTCGAAGCGA TGCAGGCGAA TCTGACCCGG CTCGCTGACC TCACCACGGA ATTGCGGCGC
CAACTCGGTC CCCTTGGCCG GCAGGCGGAA ACGGCGCGGA AGGCCGCGCG CATCCAAGCC
GATCTCCGCG ATGCCCGGTT GCGTCTGCTT GCTGATGATT TGGTCACGCT GCGGGCGGAG
CTCGAACGGG ACATCGCTGA CGAGAACGCC GCCCGTGCCC GCCGCGACGA ATTGGAACAA
CATGTGCGCC GGTTGCGCGC ACGCGAAACG GAATTGGAAG CGGCCCTGTC GACCGATGCC
CACCGGTCCG CGGCCGCGCA GCAGACGTGG TACCGGTTGT CGTCGCTGCG GGAACGGCTC
CGGGGAACCG CCGAGCTTGC GGCGGAACGG TGTCGGCAGG CCCGATTGGC GCAGGAGGAG
ACCTGGCAGG GGCGGGACGC CGAGCAGTTG GACGCCGAGG CTGCGGCGGC ACGCGCGGAA
GCCGGGCAGC TGGACGTCGA GCTGACCGCC TTGCGGGCGG CGCTCGCCGA GGCGAGTGAA
CGCCGGCGTG CGGCGGAAGC CGCGCTCGCC ACCGAGGAGC AGCGCTTCGC CCTCGCGCTG
CGGGCGGCTG CGGATCGGCG GGAGACGCTG GCCCGGCTGG CCGGCCAGGT CGCTGCGCAG
CGGACTCGGG TCGCGGCCGG TGAGGAGGAG ATCGGCCGGC TTGCCGCCGC CGCTGCTGAG
GCGCGGGCCC GTGCGGACCG GGCGCAGCAG GAATTTCAGG CACTGGAAAG CCAGATCGCC
GGTCTCGACG AAGGGGAAGT CGGACTGGAT GCCGACTACG AACGGGCGGC GGAGGCGCTG
ACCGCGGCGG AGGAACGGCT GGCGGCGCTT CGAGAGCGCG AACGGGAGCT TGAGCGGGCG
CGCGCCTCGC TCGCGGCTCG GGTGGATGCG CTTGCGCTGA GTGCGACTCG CAAGGACGGT
GCCGCGGCGC TGCTTGATGC CGCCGTACCG GGGACGGTGG GTGCCGTCGC CCGCACGCTG
CGGATCGAGG CCGGCTACGA GGCCGCGTTG GCCGCCGTCC TTGGGGATGT CGCCAACGGC
GTCGCTGTCA CCTCGGTCGA CGCAGCACTC GCCGGCATGC GGCGGCTCAA GGAAGAGGAC
GCGGGTCGTA CCTCCCTATT GATCGGAGGA TTGCCCGAAT CCGGGCATGC CGGTACAGCA
CCGCCGGATG GCCGCTGGTT ACGGGATCTC GTCGATGCCG CACCCGAATT CCGCGGCACG
CTGGACGTTC TGCTCCGCAA CGTTGTCGTC GTCGACGACC TGCAGACTGC GCACGCGCTC
GTGACCCGGC ACCCCGGCCT TCGCGTCGTC ACGCGGGACG GTGACCTGCT GGCCGCCGCC
GAGGCTGCCG GTGGGTCAGC GACAGCGCCG TCCCTCTTGG AGGTCCAGGC CGCCCTGGAC
GATGCACGCC GCCAGCTGGA CGAGGTGGTC GCACGCCAGC ACCAGCTTCG GTTCGAGATA
GCCGCGGCGG AACAGGCCCG TGAACAGGCC GCGGCTGCGG CGGACGCCGC GCTTGCCCAA
CTCCACGAGT CGGACGCCGC CATGGCCGCT ATTGCCGAGC AGCTTGGCCA CCTCGGAGCG
CAGGCGCGGG CCGCAATGGC CGAAGCGGAT CGGCTTGCCG GTTCCATTGC GCAGGCCCGG
GAGGCCAACG AGCGGGATCG GGAGCGGCTT GCCGAATTGG AGCGCGCCCT TGCGGCCGCC
CAAGAGGCGG ACGACGTCCC CGAAGAACCC TCGGCGGAGG AGCGGGATCG GCTGGCAGAG
CTTGTCGCGG ACGCACGCGC CGAAGAAACT GAGGCACGGC TTGCCGTTGG CACGGCGAAC
GAACGCTATC GGGCGGCGTT GCAGCGGGCT GAGGAGCTGT CCGCTGCAGC ACAGGCGGAA
CGGGCGGCTC GGATTCGGGC GGCCCGGCAG CGGGAAGTGC GGCGACGTGA GGCGGTCGTC
GCAGCCGCGG TGGCCCAGGC TTCGCGGGTG ATTCTGCGCC GGCTGGAGCG GTCGTTGACC
GAGGCGGACG CCGAGCGGCG CGTCGCGGAT GATGACCGTG CCGCCCGGGA GGCGGAGCTT
GCCCGGGTCC GGGACGAGTT GCGTGCAGTC GGTGACGAAC TCGAGAAGTT GACGGATGCC
GTGCACCGTG ACGAGGTGGC CCGCGCCGAA CTGCGGCTGC GGATGGAGCA GGTCACCGGG
CGGGCAATGG AGGAATTCGG CGTCGACGCG GACACGCTGG TCGCGGAATA TGGTCCGCAT
GTTCCGGTGC CGGTCGCGGC CGAGACCGAT GCAACCGACG GTGAGACGGA CGCCGTCGAG
ACTGTCCCGT ACGTGCGGGC CGAACAAGAA AAGCGGGCCC GGTCGGCCGA ACGCGCCCTC
GCTGCGCTCG GCAAGGTGAA TCCGCTGGCC TTGGAGGAAT TCGCAGCGCT CGAGGAACGC
CACCGTTTTC TCAGCGAGCA GCTCGAAGAC CTGAAGAAGA GCAGGCGTGA TTTGCTGGAA
ATCGTCCGTG AGGTGGATGA GCGGGTGCAG GAGGTCTTTG CGTCGGCGTT TGCGGACACC
GCGCGGGAAT TCGAGCAGGT GTTTGCACGA TTGTTCCCCG GCGGTGAGGG ACGCCTGGTG
CTCACCGAGC CGAATGACCT GCTCGCCACC GGTATCGACA TTGAAGCCCG GCCGGCGGGG
AAGAAAGTGA AGCGTCTGTC GCTGCTCTCC GGCGGCGAAC GGTCACTGAC CGCACTCGCA
TTCCTGGTCG CGCTCTTCAA GGCACGGCCC AGCCCGTTCT ACGTCGTCGA TGAGGTGGAA
GCCGCCCTCG ACGAGACGAA TCTTCGTCGG ATGTTGGACA TTTTCGAAGA GTTGCGGGAG
AGCAGTCAAC TCATCATCGT CACGCACCAG CAACCGACGA TGGAAATCGC CGACGCGTTG
TACGGTATTT CGATGCGCGG CGACGGTGTC TCAACGGTCA TCAGTCAGCG GTTGCGGGAC
CGGGACCTCG AACCGCAGCC GGCGTAG
 
Protein sequence
MYLKSLTLRG FKSFASTTTL RFEPGITCVV GPNGSGKSNI VDALAWVMGE QGAKSLRGGK 
MEDVIFAGTA SRPPLGRAEV VVTIDNSDGA LPIEYSEVTL SRIMFRNGGS EYAINGRPCR
LLDIQELLSD SGIGREMHVI VGQGQLEEVL HATPEERRGF IEEAAGVLKH RKRKEKALRK
LEAMQANLTR LADLTTELRR QLGPLGRQAE TARKAARIQA DLRDARLRLL ADDLVTLRAE
LERDIADENA ARARRDELEQ HVRRLRARET ELEAALSTDA HRSAAAQQTW YRLSSLRERL
RGTAELAAER CRQARLAQEE TWQGRDAEQL DAEAAAARAE AGQLDVELTA LRAALAEASE
RRRAAEAALA TEEQRFALAL RAAADRRETL ARLAGQVAAQ RTRVAAGEEE IGRLAAAAAE
ARARADRAQQ EFQALESQIA GLDEGEVGLD ADYERAAEAL TAAEERLAAL RERERELERA
RASLAARVDA LALSATRKDG AAALLDAAVP GTVGAVARTL RIEAGYEAAL AAVLGDVANG
VAVTSVDAAL AGMRRLKEED AGRTSLLIGG LPESGHAGTA PPDGRWLRDL VDAAPEFRGT
LDVLLRNVVV VDDLQTAHAL VTRHPGLRVV TRDGDLLAAA EAAGGSATAP SLLEVQAALD
DARRQLDEVV ARQHQLRFEI AAAEQAREQA AAAADAALAQ LHESDAAMAA IAEQLGHLGA
QARAAMAEAD RLAGSIAQAR EANERDRERL AELERALAAA QEADDVPEEP SAEERDRLAE
LVADARAEET EARLAVGTAN ERYRAALQRA EELSAAAQAE RAARIRAARQ REVRRREAVV
AAAVAQASRV ILRRLERSLT EADAERRVAD DDRAAREAEL ARVRDELRAV GDELEKLTDA
VHRDEVARAE LRLRMEQVTG RAMEEFGVDA DTLVAEYGPH VPVPVAAETD ATDGETDAVE
TVPYVRAEQE KRARSAERAL AALGKVNPLA LEEFAALEER HRFLSEQLED LKKSRRDLLE
IVREVDERVQ EVFASAFADT AREFEQVFAR LFPGGEGRLV LTEPNDLLAT GIDIEARPAG
KKVKRLSLLS GGERSLTALA FLVALFKARP SPFYVVDEVE AALDETNLRR MLDIFEELRE
SSQLIIVTHQ QPTMEIADAL YGISMRGDGV STVISQRLRD RDLEPQPA