Gene Acel_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1561 
Symbol 
ID4485357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1758678 
End bp1759202 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content69% 
IMG OID639730345 
ProductSSU ribosomal protein S16P 
Protein accessionYP_873319 
Protein GI117928768 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0890595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGTAA AGATCAGACT GACCCGGATG GGCAAAATCC GCGCACCCTA CTACCGCATC 
GTCGTGGCTG ACGCCCGGAC CAAACGGGAC GGCCGCGCTA TCGAAGAGAT CGGCCAGTAC
GACCCGAAGC AGGAACCCTC CCTGATCCGG GTGAACAGTG AGCGGGTGGC GTACTGGCTC
TCGGTCGGCG CCCAGCCGAC TGAGCCGGTC AAGGCGTTGC TGAAGGTGAC TGGCGATTGG
CAGCGGTTCA CCGGCGAACC AGCTCCGCCG CCGATGAAGA CTGCGCCGCC GAAACCGGAC
AAGAAGGCGC TTTTCGAAGC TGCGGCTAAG GAGGCGGCGG GTGAGCCGCG GGCTGAGGCG
ACGACGTCGC GGAAGCGGTC GGGCAAGCAC GACAAGGGTG CGGAGACCAC CCCGGCCGCT
GAGGCTGCGC CTGACGCGGC AGCCTCCGCC GACGAACCGG CGGGCGGCGC CTCGACGGCC
GCCGAGTCGC AGGACGCCAC CACCGATGCC ACCCCGTCCG CGTAG
 
Protein sequence
MAVKIRLTRM GKIRAPYYRI VVADARTKRD GRAIEEIGQY DPKQEPSLIR VNSERVAYWL 
SVGAQPTEPV KALLKVTGDW QRFTGEPAPP PMKTAPPKPD KKALFEAAAK EAAGEPRAEA
TTSRKRSGKH DKGAETTPAA EAAPDAAASA DEPAGGASTA AESQDATTDA TPSA