| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1546 |
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| Symbol | |
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| ID | 4485219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | - |
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| Start bp | 1744628 |
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| End bp | 1745497 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639730330 |
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| Product | RNA polymerase sigma factor WhiG |
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| Protein accession | YP_873304 |
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| Protein GI | 117928753 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.251252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGACAGA ACATTGACGC GGTCACCGAG CAGGCAGGAC CGGATGAGGT GACGGCAGGA
CTCGGCGAAA CCCCACCGGA GGAGGTGACC TCCCGCGAGG ACGCCGAGGC GGCGCTCCGT
GACCTGTGGC GGCGGTTCAA GGAGACCGGC GACCCCGAGC TGCGTGAGCG TCTCATCCTG
CATTACTCGC CCCTGGTCAA GTACGTCGCC GGCCGGGTCG GTGTCGGCCT GCCGCCCAAT
ATCGAGCAGG CCGACTTGGT CTCCTATGGG ATCTTCGGTC TCATTGACGC GATCGAAAAG
TTCGATCTCG ACCGCGCCAT CAAGTTCGAG ACGTATGCCA TCAATCGCAT TAAGGGCGCG
ATTATCGATG AATTGCGGGC CATCGACTGG ATTCCCCGCT CGGTCCGCTA TAAGGCCCGT
GAAGTCGAGA AAGCGTACGC CGCACTCGAA CACAAGCTGC ACCGGACGCC TACCGAGGCG
GAGGTTGCTG CAGAACTCGG CATTAGTCTC GATGAACTGC ACGCCATTTT CAGCCAGGTA
TCCTTCGTCA ATGTGATTGC GCTTGATGAA TTGCTCAACG TCGGCGGGGA CCGCGGCGAT
CGGCTCTCTC TGGTCGACAC GCTCGAAGAC ACCAAAGCTG AGGATCCCGT CGAAGCATTC
GAGACCGAGG AGACGAAGTA CCTTCTGTCG CGCGCGATCA ACGCTCTTCC TGAGCGCGAG
AAAATCGTTA TCACGTTGTA TTACTACGAA GGGCTGACGC TTGCGGAAAT CGGCCAGGTT
CTCGGCGTCA CCGAGAGCCG GATCTGTCAA ATGCACACCA AGGCGGTGCT GCAGCTGCGG
GCGAAATTGG CGGAGCAGAC CGGGGGGTAG
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| Protein sequence | MGQNIDAVTE QAGPDEVTAG LGETPPEEVT SREDAEAALR DLWRRFKETG DPELRERLIL
HYSPLVKYVA GRVGVGLPPN IEQADLVSYG IFGLIDAIEK FDLDRAIKFE TYAINRIKGA
IIDELRAIDW IPRSVRYKAR EVEKAYAALE HKLHRTPTEA EVAAELGISL DELHAIFSQV
SFVNVIALDE LLNVGGDRGD RLSLVDTLED TKAEDPVEAF ETEETKYLLS RAINALPERE
KIVITLYYYE GLTLAEIGQV LGVTESRICQ MHTKAVLQLR AKLAEQTGG
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