Gene Acel_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1542 
Symbol 
ID4485215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1739398 
End bp1740225 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content62% 
IMG OID639730326 
ProductSSU ribosomal protein S2P 
Protein accessionYP_873300 
Protein GI117928749 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.3492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCG TCACAATGAA AGAACTCCTT GCCGGCGGGG TGCATTTCGG GCATCAAACG 
CGCCGGTGGA ACCCGAAGAT GAAGCGTTTC ATCTTCACCG AACGCAACGG CATTTACATC
ATTGATCTTC AGCAGTCGCT GTCGTACATC GAACGAGCGT ACGAATTCGT GAAAGACACC
GTCGCCCGCG GCGGCACGGT GTTGTTCGTG GGGACGAAGA AGCAGGCGCA ACAGGCGATT
GCCGAGCAGG CGACCAGGGT CGGGATGCCG TACGTCAACC AGCGGTGGCT GGGCGGCATG
CTCACGAATT TCTCCACCGT CTACAAGAGA TTGCAGCGAT TGAAGGAGCT CGAGCTCCTG
GAGCAGAACG GGTCGCTCTT CGGTCAGGCG ACCAAGAAAG AAGCCTTGAT GCTGCAGCGC
GAGAAGGAGA AGCTCGAACG CACCCTCGGC GGCATTCGTG ACATGACGCG GCTGCCCGCT
GCGGTATGGA TCGTCGACAC GAAGAAGGAA CACATCGCCG TCGATGAGGC CCGTAAACTC
GGCATCCCCG TGGTCGCCAT TCTGGACACC AACTGCGACC CGGACGAAGT TGACTATCCG
ATTCCGGGCA ACGACGACGC CATCCGGTCG GTGTCCCTGC TGACTCGGGT CATTGCCGAC
GCGGTTGCGG AAGGTCTGAT GGCGCGGGCC GCGGCGCGGG CGACCGACGG CAAACCCGAA
CCCGAGCCGG TGCCGGGTCA GGAGTTGGGT GCGGACGAGC CGCTTGCCGA TTGGGAGCGG
GAACTTCTCG CCCGCCAGGG CGTGGACGCC GACGAGCTCG GTGTCTGA
 
Protein sequence
MAVVTMKELL AGGVHFGHQT RRWNPKMKRF IFTERNGIYI IDLQQSLSYI ERAYEFVKDT 
VARGGTVLFV GTKKQAQQAI AEQATRVGMP YVNQRWLGGM LTNFSTVYKR LQRLKELELL
EQNGSLFGQA TKKEALMLQR EKEKLERTLG GIRDMTRLPA AVWIVDTKKE HIAVDEARKL
GIPVVAILDT NCDPDEVDYP IPGNDDAIRS VSLLTRVIAD AVAEGLMARA AARATDGKPE
PEPVPGQELG ADEPLADWER ELLARQGVDA DELGV