Gene Acel_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1504 
SymbolthyX 
ID4486268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1698765 
End bp1699496 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content63% 
IMG OID639730288 
ProductFAD-dependent thymidylate synthase 
Protein accessionYP_873262 
Protein GI117928711 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1351] Predicted alternative thymidylate synthase 
TIGRFAM ID[TIGR02170] thymidylate synthase, flavin-dependent 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00118656 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC CCCATCCCAT GGAGATCGAG TTCCGCAGCG ACGTCACCGT CGAACTGATC 
CGCGCCGCCG CCAGCGACGC CGACGTTCTT TTCGCCGCCC GGGTCTCCAC CAAAGGAGAG
CAATCCCTCG ACGACGTGCA CGCCGATCCG GCGCGGTCCA AAGGGCTCAT CAATTACCTC
ATGCGCGACC GGCACGGCAC ACCGTTCGAA CACAATTCGA TGACGTTCTA CGTGCAGGCT
CCGATTTTCG TGTTCCGCGA AATGATGCGG CATCGGATTG CGTCGTACAA CGAGGAGAGC
GGCCGGTACC GTCAGCTCCG CCCGGTTTTT TACGTTCCCG CGCCCGATCG CAAACTCGTC
CAGCAGGGCA AACCAGGGCA TTACGAATTC GTGGACGGCA CCCCTGAACA GTACAAAATC
GTGGTCGAAG CGACCAAGCG GGCGTGTGAG GAGGCGTATG CGGCCTACCT GGAAATGCTC
AACGCGGGTG TTGCCCGCGA AGTCGCCCGC GGCGTTTTAC CGGTCGCCAT ATACTCCTCG
GCGTACGTGA CCCTCAACGC CCGGTCGCTG ATGAATTTCT TGTCGTTGCG GACCCGGCGG
GAGTCGAGCC GGTTTCCGAG CTTTCCGCAG CGTGAGATTG AAATGGTCGC CGAGCGGATG
GAGGCCGAGT GGGCGAGGCT CATGCCGCTC ACCCACGAAG CCTTTGAGGC GCACGGCCGC
GTGGCGCCGT GA
 
Protein sequence
MTEPHPMEIE FRSDVTVELI RAAASDADVL FAARVSTKGE QSLDDVHADP ARSKGLINYL 
MRDRHGTPFE HNSMTFYVQA PIFVFREMMR HRIASYNEES GRYRQLRPVF YVPAPDRKLV
QQGKPGHYEF VDGTPEQYKI VVEATKRACE EAYAAYLEML NAGVAREVAR GVLPVAIYSS
AYVTLNARSL MNFLSLRTRR ESSRFPSFPQ REIEMVAERM EAEWARLMPL THEAFEAHGR
VAP