Gene Acel_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1503 
Symbol 
ID4486267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1697685 
End bp1698611 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content69% 
IMG OID639730287 
Productdihydrodipicolinate synthase 
Protein accessionYP_873261 
Protein GI117928710 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000230491 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGT CTCTTCGCCC TGCGCCGTTC GGCCGGGTCC TTACCGCGAT GGTGACTCCG 
TTCACCGCCG ACGGGGCCCT GGACCTCGAC GGAGCCGCCC GGCTCGCGAC GTACCTGGTC
GACCACGGCA ACGACGGACT AGTGATCAGC GGGACGACCG GCGAATCACC CACGACGACC
GATGACGAGA AGGAGCGGTT GTTGCGCGCC GTCCTGGACG CCGTCGGCGA TCGGGCCACT
GTGGTCGCCG GGGTCGGAAC CAACGACACC CGGCACACAA TCGAGCTGGC GCAGCGGGCG
GAGAAGGCCG GAGCGCACGG CCTTCTCGTC GTCACCCCCT ATTACTCCAA GCCGCCGCAG
GCCGGACTGC TTGCGCATTT CCGGCAGGTC GCTGATGCGA CCGGCCTGCC GGTGATGCTG
TACGACATCC CCGGCCGGAC CGGCACGGCG ATCGAACCGG AGACGATGGT CCGGCTTGCC
GAGCACGAGC GGATCGTCGC GGTCAAGGAC GCCAAGGGTG ATTTCGAGGC CAGTTCGTGG
GTGCTCGCCC GAACCGACCT TGCCTACTAC TCCGGGGACG ACAAGAACAC CCTGCCGTTG
TTGGCGATCG GTGCGGTTGG TGTCGTCGGC GTCCCCACGC ATGTGTTCGG CACCCAGACC
GGCGCGATGA TTGCCGCGTA TCTGCGGGGC GATGTCGACG GCGCACTCGC GTTGCACCGG
CAATTGCTTC CGGTCTTCAC CGGATTTTTC CGCACCCAAG GGGTGATTCT CGCGAAAGCT
GCGCTGCGGC TGGCCGGTCT GCCCGGCGGG CCGGTCCGCC CGCCGCTCGT CGACGCCACC
GCTGAGCAGG TTGCCCGGCT GCGCGAGGAC ATGGCCGCGG CTGGATTCAC CGAATTCGCG
GAGGGCGCGG AGGAGCGGCG CGGGTGA
 
Protein sequence
MTTSLRPAPF GRVLTAMVTP FTADGALDLD GAARLATYLV DHGNDGLVIS GTTGESPTTT 
DDEKERLLRA VLDAVGDRAT VVAGVGTNDT RHTIELAQRA EKAGAHGLLV VTPYYSKPPQ
AGLLAHFRQV ADATGLPVML YDIPGRTGTA IEPETMVRLA EHERIVAVKD AKGDFEASSW
VLARTDLAYY SGDDKNTLPL LAIGAVGVVG VPTHVFGTQT GAMIAAYLRG DVDGALALHR
QLLPVFTGFF RTQGVILAKA ALRLAGLPGG PVRPPLVDAT AEQVARLRED MAAAGFTEFA
EGAEERRG