| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1502 |
|---|
| Symbol | |
|---|
| ID | 4486266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 1696003 |
|---|
| End bp | 1697688 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639730286 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_873260 |
|---|
| Protein GI | 117928709 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
|---|
| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000603701 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCATC CCCACCCGGA ACTCGGTGCG CCGCCGCCGT TGCCGCCCCA CGGCCTGCGG
ATCGTCGCGC TCGGCGGGCT CGGCGAAGTC GGGCGGAACA TGACGGTCTT CGAATTCGGC
GGCCGGCTCC TCATCGTCGA CTGCGGCGTT CTGTTCCCCG ACCCTGAGCA GCCCGGTGTC
GATTTGATCC TGCCCGACTT CGATTACATC CGCGGCCGGT TGGACGCCGT CGAGGCGCTC
GTCCTCACCC ACGGCCATGA AGACCACACC GGCGCGGTTC CGTTTCTGCT GCGGGAGCGG
CCCGACATTC CGCTCGTTGG GTCGCCGCTC ACCCTGGCGT TCGCCGAGTC CAAACTCGCC
GAGCATCGCA TCACCCCGTA CACGTTGACG GTCCGGGAAG GCAGTCGCGA GCGGCTCGGT
CCGTTCGACT GCGAATTCTT CGCCGTCAAC CACTCGATTC CGGACGGCCT GGCGGTCGCG
ATCCGTACAC CGGCCGGGCT GGTGCTGCAC ACCGGCGATT TCAAGATGGA CCAATTGCCG
CTGGACGGAC GGCTGACCGA TCTCGGCGGC TTTGCGCGGC TCGGCGCCGA GGGTGTCGAT
CTGCTGATGT CGGACTCCAC GAACGCCGAA ATTCCGGGGT TCGTCACGCC GGAACGGGAC
ATCGCCCCGG TCCTGCGGGA CATTTTCTCC CGGGCCGGCC GCCGGATCAT CGTGGCGTGC
TTCGCCAGCC ATGTGCACCG CGTGCAGCAG GTGCTGGACG CCGCCGCCGC GTTCGGCCGG
AAGGTTGCCT TTGTCGGGCG ATCGATGGTG CGCAACATGG GAGTCGCGCG CGATCTCGGG
TATCTGCAGG TCCCCGGTGA CCTCCTCGTC GATGCGCGGG AAATTGATGC GTTGCCGCCG
GAAAAGGTCG TCCTCATCTC CACCGGTTCG CAGGGTGAAC CGCTCTCGGC CCTCTCCCGG
ATGGCCAACC GCGACCACCC GGTCCGGATC GAACCGGGTG ACACGGTGGT GCTGGCGAGT
TCGCTCATTC CCGGGAACGA GTCGGCGGTG TATCGAGTCA TCAACGGCCT GGGGCGGTGG
GGCGCCACCG TCATCCATAA AGGGAATGCG CTGGTCCACG TCTCGGGGCA CGCGCCGGCC
GGGGAATTGT TGTACGTGCT CAACCTCACC CGTCCGAGCA ATTTCGTTCC CATCCACGGC
GAATGGCGGC ATCTTCGCGC GCACGGCGAA TTGGCGAAGC TCACCGGCGT ACCCGCTGAC
CGGGTGCTGC TCGCGGAGAA CGGGATGGTC ATGGATCTGG TCGACGGCAA AGCGTCGATT
GTCGGCGCCG TGCACTGCGG TTACGTGTAC GTCGACGGGA TCTCCGTCGG CGAGGTGACC
GAGGCGTCGC TGAAAGACCG GCGCATCCTC GGCGAGGAGG GCTTTGTGTC CGTGGTCGTC
GTCGTGGACG CCGCCGCAGG CAAGGTGGTC GGCGGACCGG AGATCCACGC GCGCGGGTCC
GGCATCGATG ACGCCGCGCT GGTCGACGTC CTCCCCAAGG TGCATGAGTC GGTCGAGCGT
GCCATGGCCG ACGGCATGGC CGATATCGCG GAACTGGAGC AGGTGGTTCG CCGCACGGTC
GGCCGCTGGG TGAACGAGAC CTACCGCCGC CGCCCGATGA TCATCCCCAT GGTGGTGGAG
GTATAG
|
|---|
| Protein sequence | MSHPHPELGA PPPLPPHGLR IVALGGLGEV GRNMTVFEFG GRLLIVDCGV LFPDPEQPGV
DLILPDFDYI RGRLDAVEAL VLTHGHEDHT GAVPFLLRER PDIPLVGSPL TLAFAESKLA
EHRITPYTLT VREGSRERLG PFDCEFFAVN HSIPDGLAVA IRTPAGLVLH TGDFKMDQLP
LDGRLTDLGG FARLGAEGVD LLMSDSTNAE IPGFVTPERD IAPVLRDIFS RAGRRIIVAC
FASHVHRVQQ VLDAAAAFGR KVAFVGRSMV RNMGVARDLG YLQVPGDLLV DAREIDALPP
EKVVLISTGS QGEPLSALSR MANRDHPVRI EPGDTVVLAS SLIPGNESAV YRVINGLGRW
GATVIHKGNA LVHVSGHAPA GELLYVLNLT RPSNFVPIHG EWRHLRAHGE LAKLTGVPAD
RVLLAENGMV MDLVDGKASI VGAVHCGYVY VDGISVGEVT EASLKDRRIL GEEGFVSVVV
VVDAAAGKVV GGPEIHARGS GIDDAALVDV LPKVHESVER AMADGMADIA ELEQVVRRTV
GRWVNETYRR RPMIIPMVVE V
|
|---|
| |