Gene Acel_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1479 
Symbol 
ID4485568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1660255 
End bp1661082 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content69% 
IMG OID639730263 
ProductLexA repressor 
Protein accessionYP_873237 
Protein GI117928686 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0381882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGA GCACACCGCG TCCAGCGCGC AGCCAAGCCG CGTTGACGAC GTCGTCCGAG 
GAGAGCCCCG ACCGCGTCGA GCGCGGCGGC GACGGCGTTG CCACGGTCAC CGATTTCCCC
GATGGGCCGC CGGACGAGAC CGGTCTGACG CCTCGGCAGC GGCGCATCCT TGACGTCATC
CGAGATTCGG TGCGCCGTCG CGGTTATCCG CCGAGCATGC GGGAAATCGG TGAGGCCGTC
GGCTTGACGT CAACGTCGAG CGTGGCTCAT CAGCTCATGG TTCTGCAGCG CAAGGGTTTT
CTCCGCCGCG ATCCGAACCG GCCGCGGGCC GTCGAAATCC GGAGCGCGGA ATCCGCGGTA
CCCGATGCCT CCGCCGGGCA TTCCCCAGCC GCGGACCGGG CGCCGTCAGC ACGGCGCCCA
CCTCGCGGGC CATCCCCCAT CGACAGCAAC CCCGACGTGG TCGCCGTCCC CCTGGTCGGT
CGTATCGCCG CCGGCGGTCC GGCCCTCGCC GAGCAGCTGA TCGAGGACGT CGTCCCGTTG
CCGCGTCAGC TGGTCGGAGA GGGAACGCTC TTTCTCCTTC AGGTCAAGGG CGATTCCATG
GTTGACGCGG CGATTTGCGA CGGCGACTGG GTCGTCGTCC GTCAACAACC GGTGGCCGAG
AACGGTGACA TCGTCGCGGC CATGATTGAC GGCGAGGCGA CGGTGAAGAC GTTCAAGCGC
CGCGGCGCGC ACATCTGGCT CATGCCGCAT AACCCCCAGT ACGAGCCGAT CCCCGGGGAT
GAGGCGACCA TTCTCGGCCG GGTGGTCGCG GTGCTCCGGC GGTTGTAA
 
Protein sequence
MKRSTPRPAR SQAALTTSSE ESPDRVERGG DGVATVTDFP DGPPDETGLT PRQRRILDVI 
RDSVRRRGYP PSMREIGEAV GLTSTSSVAH QLMVLQRKGF LRRDPNRPRA VEIRSAESAV
PDASAGHSPA ADRAPSARRP PRGPSPIDSN PDVVAVPLVG RIAAGGPALA EQLIEDVVPL
PRQLVGEGTL FLLQVKGDSM VDAAICDGDW VVVRQQPVAE NGDIVAAMID GEATVKTFKR
RGAHIWLMPH NPQYEPIPGD EATILGRVVA VLRRL