| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1451 |
|---|
| Symbol | |
|---|
| ID | 4485088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 1621497 |
|---|
| End bp | 1622261 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639730235 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_873209 |
|---|
| Protein GI | 117928658 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.388057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGG GCGGAGAACC ACCGGTCATC CGGCTGTGGC GGGTGACGAA GACGTACGGC
AGCGGGGCGG CCCGCGTCCA TGCCCTGCGC GGTGTTTCAC TGGTCGTCCA ACGCGGCGAT
TACGTCGCCA TCATGGGCGC CTCCGGTTCG GGCAAGACGA CGCTGATGAA TATCCTCGGC
TGTCTCGATT CCCCGACGTC CGGGCGCTAC CTTCTGGACG GAATAGACGT CGACGTGATG
GACGACGACG AGCTCGCCGC CGTACGAAAT CGTCGTATCG GATTTGTTTT CCAGAGCTTC
CACCTTCTCC CGCGATTGAC GGCACTGCAG AACGTCGAAT TACCGCTCAC CTACGCCCGG
GTTCGTCGTG CCGAACGGCG CCGCCGTGCG GTAGCCGCGC TCCATGCGGT GGGTCTGGCG
CACCGCCTGG GGCACCGGCC GGCCATGATG TCCGGCGGTG AACGGCAACG AGTTGCCGTC
GCTCGGGCCA TCGTCGTCGA TCCATCACTG GTTCTCGCCG ACGAACCGAC CGGGAACCTC
GATTCAGCAG CGACCGCGGA GGTTTTGGAG CTGTTCGCCC AGCTGAACGA GGTGGGTCGC
ACCATTGTGC TCATCACCCA CGAAGCGGAT GTCGCCCGCC ACGCCAAGCG CATTGTGCGG
GTGCGTGACG GCCGGATCGT GGACGACGTC CGCATCGCGC CGCTCGCCGG ACCACCGCCC
CGGCCGGGAC TTCCCGGCCA CCGTGCCGTG GGGAGCATCC CGTGA
|
|---|
| Protein sequence | MTAGGEPPVI RLWRVTKTYG SGAARVHALR GVSLVVQRGD YVAIMGASGS GKTTLMNILG
CLDSPTSGRY LLDGIDVDVM DDDELAAVRN RRIGFVFQSF HLLPRLTALQ NVELPLTYAR
VRRAERRRRA VAALHAVGLA HRLGHRPAMM SGGERQRVAV ARAIVVDPSL VLADEPTGNL
DSAATAEVLE LFAQLNEVGR TIVLITHEAD VARHAKRIVR VRDGRIVDDV RIAPLAGPPP
RPGLPGHRAV GSIP
|
|---|
| |