| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1430 |
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| Symbol | |
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| ID | 4485955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | - |
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| Start bp | 1598533 |
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| End bp | 1600020 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639730214 |
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| Product | RNA polymerase, sigma 28 subunit |
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| Protein accession | YP_873188 |
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| Protein GI | 117928637 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.916682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGATA GTCGTCGGTG GTCGTTTCTG CGCAACCTGC CGAGGATGGC AAACGTGGTA
GCCCGAAACG TCGATCGTCA GCTGTCCCAC GACACGTCGG CCGCTTCGCA TGATGCGGCG
TCCAACGGCG GCGGCGGCCT ACCTGCCGCT TCGTCTGATC TCCCTGTTTC CGTAGCACCT
GACGCCGGGT CGTCGAACGG CGCGCCCGCG GCGGGTCGTG CGAATCGGCG GGCCGCGCAA
CGCGATGGTG GGCGCGGCAA GAAGTCCGGG TCGAAGTCAG CTGCGGGCGG CAAGAAGCCG
AAAACGTCGG GTAGCGCAGC GCGGCAGAGC TCCCGCACCC GCGAAGACCC GGCGGCTGAT
GACCCAATCG ATCTTGATGC GGTTGGCGAC GAGCTGGATG CGGAACCGTT TGTCGACGAC
GTCGAAATTG ATCTGTCCGA TGTGGACGTC GATCTCGATC CGGTGGAGTT GACGGACGGC
GTCGACGTCG ACCCAGCCGA CGAAGCGACT GATCTTGCGG TCGAGGATGA GCTTCTGCTC
GATGACGACG AGCCGCAGGC ACAGTTGACG AACGCGGGTG CGACCGCGGA TCCCGTCAAG
GACTACCTCA AGCAAATCGG CAAGGTTCCG CTGCTCAACG CCGAGCAAGA AGTCGAGCTG
GCGAAACGGA TCGAGGCGGG GTTGTTCGCC GAGGAGAAGC TGAATTCCGG CGAAGAGCTG
TCGCCCGAAC TCCGCAAAGA CCTGGAGTGG ATCGCCGAGG ACGGCCGACG GGCGAAGAAC
CACTTGCTGG AAGCGAATCT GCGGCTCGTC GTTTCCCTCG CGAAGCGATA CACCGGCCGC
GGCATGCTCT TTCTCGACCT TATTCAAGAA GGAAATCTCG GCCTCATCCG TGCGGTGGAG
AAATTCGACT ACACCAAGGG ATACAAGTTT TCGACGTACG CGACGTGGTG GATTCGCCAG
GCGATTACGC GGGCGATGGC TGATCAGGCG CGGACGATCC GCATTCCCGT CCACATGGTC
GAGGTCATCA ACAAATTGGC CCGGGTGCAG CGCCAGATGC TGCAGGATCT CGGCCGCGAC
CCGACGCCGG AGGAGCTGGC GGTCGAGCTC GACATGACGC CGGAAAAAGT CATGGAAGTG
CAGAAGTACG GCCGCGAGCC GATCAGTCTG CATACGCCGT TGGGCGAGGA CGGCGACAGC
GAGTTCGGGG ACCTGATCGA GGATTCCGAG GCGATCGTGC CGTCGGACGC CGTCTCGTTC
ACCCTGCTGC AGGAGCAATT GCACTCGGTG CTGGAGACTC TCTCCGAGCG CGAGGCGGGC
GTGGTCTCCA TGCGCTTCGG CCTTACCGAC GGCCAGCCCA AGACGCTTGA CGAGATCGGC
CGGGTGTACG GGGTGACCCG GGAACGGATT CGGCAGATCG AGTCGAAGAC GATGTCGAAA
CTCCGACACC CATCCCGGTC TCAGGTGCTT CGCGACTATC TGGACTAG
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| Protein sequence | MRDSRRWSFL RNLPRMANVV ARNVDRQLSH DTSAASHDAA SNGGGGLPAA SSDLPVSVAP
DAGSSNGAPA AGRANRRAAQ RDGGRGKKSG SKSAAGGKKP KTSGSAARQS SRTREDPAAD
DPIDLDAVGD ELDAEPFVDD VEIDLSDVDV DLDPVELTDG VDVDPADEAT DLAVEDELLL
DDDEPQAQLT NAGATADPVK DYLKQIGKVP LLNAEQEVEL AKRIEAGLFA EEKLNSGEEL
SPELRKDLEW IAEDGRRAKN HLLEANLRLV VSLAKRYTGR GMLFLDLIQE GNLGLIRAVE
KFDYTKGYKF STYATWWIRQ AITRAMADQA RTIRIPVHMV EVINKLARVQ RQMLQDLGRD
PTPEELAVEL DMTPEKVMEV QKYGREPISL HTPLGEDGDS EFGDLIEDSE AIVPSDAVSF
TLLQEQLHSV LETLSEREAG VVSMRFGLTD GQPKTLDEIG RVYGVTRERI RQIESKTMSK
LRHPSRSQVL RDYLD
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