Gene Acel_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1425 
Symbol 
ID4485950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1591296 
End bp1592498 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content69% 
IMG OID639730209 
Productcystathionine gamma-lyase 
Protein accessionYP_873183 
Protein GI117928632 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.144406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CTGGGACGCC GCGGCATCCG GAGCAGAGCG ATCCTCGCTG CCAATCCGCG 
GAACCCGCCG ATACCGGCCG ATCCGGCGCC ACCCCGATCG TCTCCGGTGA CGGCACCCGC
GTTCTCACCG CCGGCGGAAT GCCCGGCGGG CAAGGCACTC CGCTGGTACC GAGTCCGGTT
TTCGCCTCCA CGTACGTGCT GCATGGAGAG CCCGCCGGCC CTTATCAGTA CGGTCGGCTG
ACGAATCCGA CCTGGACGGC GTGGGAGGCG GCGCTCGCCG ATCTCGAAGG CGGTCCGGCG
ATCGCTTTTG CCTCCGGAAT CGCCGCGGTC ACCGCCGTCC TCGCCACGAC ACTACGACCC
GGGGACACCA TGCTGATGGC GTCCGATTGC TATTACGCAA CACGTCGTCT CGCGGAGGAA
TTTCTCAGCG ATTTCGGGGT TGTGACCCGC TGGGCTCCGA CCGGGCCGGA GATGGCCGCG
CAGGTCGCGG GTGCCCGGCT GGTGTGGATC GAATCACCGA GCAATCCAGG GCTCGACGTC
TGCGATATCG CCGAGCTTGC GCGCCGATGC CGCGACGAAG GCGCTCTGCT CGCCGTCGAC
AATACGACAG CCACTCCACT CGGCCAGCAG CCACTTCTGC TTGGTGCGGA TTTCTCTGTT
GCGAGTGACA CCAAGGCGAT GACCGGCCAC AGCGACATCG TGCTGGGACA CGTTGCTTGC
CGCACCGGCG AGCTCGCCGA GCGGATCCGC GGCTGGCGCA ACAGCACCGG GGCGATTCCC
GGACCGTTCG AGACCTGGCT CGCGCATCGA TCCTTGGCCA CCCTGGATCT GCGGCTGGCT
CGGCAGGCTG ACAACGCCCG CGAACTGGCC GCAATGCTCG CCGCGCACCC CGCCGTCCGA
CGGGTGCGCT ATCCGTGGCT GCCGTCGGAT CCGGCGTACC CGCTCGCCGT GCGCCAGATG
CGTCGTCCGG GCGGGCTGGT CTCGTTCGAG CTCGCCGGCG CTGCCGAGGC CGAAGCATTT
CTCGGCGCGC TGCGCCTCGT CACCGTCGCG ACGAGTTTCG GCGGCGTTCA CTCCACGGCG
GAGCGGCGGG CGCGGTGGGG CGGCGACGAC GTCCCACCCG GCTTCATCCG GTTCAGCTGC
GGCTGCGAGG ACGCAGCGGA TTTACTCGCC GACGTCGAGC AGGCGCTCGC TCGTCTGCGG
TAG
 
Protein sequence
MNDAGTPRHP EQSDPRCQSA EPADTGRSGA TPIVSGDGTR VLTAGGMPGG QGTPLVPSPV 
FASTYVLHGE PAGPYQYGRL TNPTWTAWEA ALADLEGGPA IAFASGIAAV TAVLATTLRP
GDTMLMASDC YYATRRLAEE FLSDFGVVTR WAPTGPEMAA QVAGARLVWI ESPSNPGLDV
CDIAELARRC RDEGALLAVD NTTATPLGQQ PLLLGADFSV ASDTKAMTGH SDIVLGHVAC
RTGELAERIR GWRNSTGAIP GPFETWLAHR SLATLDLRLA RQADNARELA AMLAAHPAVR
RVRYPWLPSD PAYPLAVRQM RRPGGLVSFE LAGAAEAEAF LGALRLVTVA TSFGGVHSTA
ERRARWGGDD VPPGFIRFSC GCEDAADLLA DVEQALARLR