Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1398 |
Symbol | |
ID | 4486538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 1562489 |
End bp | 1563163 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639730182 |
Product | TrkA domain-containing protein |
Protein accession | YP_873156 |
Protein GI | 117928605 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.870164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGTGG TAATCCTCGG GTGCGGCCGG GTAGGCGCCA CCCTCGCCAA CAGCCTGGAA CGGCTGGGTC ACTCGGTCGC CATCATCGAC CAGGACGCCC ACGCTTTTCG CCGATTGCCG CCGGATTTCC GCGGGCGGAA AGTCCACGGT TTCGGCTTGC ACCGAAGCGT GCTCGAAGAA TCCGGCATCC GGCACGCGAG CGCATTCGCC GCCGTGAGCA ACGGCGACAA CTCGAACATC ATTTCGGCCC GGTTGGCGCG TGAGGTCTTC GGCGTCGAGA ACGTGGTCGC CCGCATCTAC GACATCCGGC GCGCCGAGAT TTACCAGCGG CTCGGCATTC CTACCGTCGC GACGGTCAAG TGGACCGCCG ACCAGATCCT GCGCCGACTG CTGCCCTCCG GTCTGCAGAC CGTGTGGCGG GACCCGACCG GCACGATGGC GCTCGGCGAA GTCCACGTCG ATCCCTCGTG GATCGGCCGT CCGCTGACCG AATTGGAAGG GGCCGCCGGC GCCCGGATCG CATTTGTCAC CCGATTCGGC GCCGGGGTTC TGCCGACGCC GGAGACCGTG CTGCAAGAGG GCGACCTCGT CTACCTGCTG GCCCCGGAGA CCCACCTCCG CGAGGCGGCC GAGATCCTGG GCCGGCCACG GGAAGCAGAG CGGGAACATG CGTAA
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Protein sequence | MHVVILGCGR VGATLANSLE RLGHSVAIID QDAHAFRRLP PDFRGRKVHG FGLHRSVLEE SGIRHASAFA AVSNGDNSNI ISARLAREVF GVENVVARIY DIRRAEIYQR LGIPTVATVK WTADQILRRL LPSGLQTVWR DPTGTMALGE VHVDPSWIGR PLTELEGAAG ARIAFVTRFG AGVLPTPETV LQEGDLVYLL APETHLREAA EILGRPREAE REHA
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