Gene Acel_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1398 
Symbol 
ID4486538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1562489 
End bp1563163 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID639730182 
ProductTrkA domain-containing protein 
Protein accessionYP_873156 
Protein GI117928605 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.870164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGTGG TAATCCTCGG GTGCGGCCGG GTAGGCGCCA CCCTCGCCAA CAGCCTGGAA 
CGGCTGGGTC ACTCGGTCGC CATCATCGAC CAGGACGCCC ACGCTTTTCG CCGATTGCCG
CCGGATTTCC GCGGGCGGAA AGTCCACGGT TTCGGCTTGC ACCGAAGCGT GCTCGAAGAA
TCCGGCATCC GGCACGCGAG CGCATTCGCC GCCGTGAGCA ACGGCGACAA CTCGAACATC
ATTTCGGCCC GGTTGGCGCG TGAGGTCTTC GGCGTCGAGA ACGTGGTCGC CCGCATCTAC
GACATCCGGC GCGCCGAGAT TTACCAGCGG CTCGGCATTC CTACCGTCGC GACGGTCAAG
TGGACCGCCG ACCAGATCCT GCGCCGACTG CTGCCCTCCG GTCTGCAGAC CGTGTGGCGG
GACCCGACCG GCACGATGGC GCTCGGCGAA GTCCACGTCG ATCCCTCGTG GATCGGCCGT
CCGCTGACCG AATTGGAAGG GGCCGCCGGC GCCCGGATCG CATTTGTCAC CCGATTCGGC
GCCGGGGTTC TGCCGACGCC GGAGACCGTG CTGCAAGAGG GCGACCTCGT CTACCTGCTG
GCCCCGGAGA CCCACCTCCG CGAGGCGGCC GAGATCCTGG GCCGGCCACG GGAAGCAGAG
CGGGAACATG CGTAA
 
Protein sequence
MHVVILGCGR VGATLANSLE RLGHSVAIID QDAHAFRRLP PDFRGRKVHG FGLHRSVLEE 
SGIRHASAFA AVSNGDNSNI ISARLAREVF GVENVVARIY DIRRAEIYQR LGIPTVATVK
WTADQILRRL LPSGLQTVWR DPTGTMALGE VHVDPSWIGR PLTELEGAAG ARIAFVTRFG
AGVLPTPETV LQEGDLVYLL APETHLREAA EILGRPREAE REHA