| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1393 |
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| Symbol | |
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| ID | 4486533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | - |
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| Start bp | 1553509 |
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| End bp | 1555410 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639730177 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_873151 |
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| Protein GI | 117928600 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.440641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCATTG GTCTGCTGGA ATCCGTCAAC ACCCCCGAGG ATCTGCGTGC GCTCGATCAT
GCGCAGCTGA CCCGGTTGGC CGGCGAGATC CGCGACTTTC TCGTGCAGGC GGTGTCACGA
ACCGGCGGCC ATCTCGGCCC GAATCTTGGC GCCGTCGAGC TCACCATCGC CCTGCACCGG
GTCTTCGATT CCCCGTCCGA ACCGATTCTC TTCGACACCG GGCACCAGGC GTACGTCCAC
AAGATTCTCA CCGGACGGCG GGACGGGTTC GCGATGCTGC GTCAACGCGG GGGTCTCTCG
GGCTACCCGT CACGAGCTGA ATCCGAGCAC GACTGGATCG AGAATTCGCA CGCGTCGACC
GCGTTGAGTT ACGCCGACGG GCTGGCGAAA GCGCTCGCCC TGCGGGGGGA GAGGCGGACC
GTTGTCGCCG TCGTCGGTGA CGGCGCCCTG ACCGGCGGAA TGTGCTGGGA GGCGCTCAAC
AACATTGCGG CGGCGAAGGA TCGCAGCATC GTCATCGTCG TCAACGACAA CGGCCGGTCG
TACGCACCGA CGATCGGCGG GCTGGCCGCG CATCTCAATG CACTGCGCAC CAACCCGAAT
TACGAGAAGG TACTGGCGCG CGTCAAGGAC GTGCTGAGCC GTACGCCACT CGTCGGGGAG
GCGCTGTACG ACACCCTGCA CGGCATCAAG AAGGGGTTGA AAGACGTCCT TACGCCGCAA
GGACTTTTTG AGGACCTCGG GTTGAAATAC CTTGGCCCGA TCGACGGCCA CGATATCGGC
GCCATGGAGC ATGCTTTTCT TCAAGCGAAG CGGTTCGGCG GCCCGGTCAT CGTGCATTGC
GTGACGCGGA AGGGGTACGG TTACGCACCG GCCGAGCGGG ATGAAGTTGA CCACCTGCAC
GGCCCGGGTG CGTTCGATCC GCGCACCGGC AAGGAAATGC CCAAACCCCG CAGCTGGACG
GCTGTCTTCT CCGAGGAAAT CGTGCGGATC GGCGCGGACC GCCCGGACGT TGTTGCGCTG
ACGGCGGCGA TGCTGCATCC GGTAGGGCTG GCGGAATTCG CCGCGGCGTA TCCGGATCGC
GTCTTCGACG TTGGGATCGC CGAACAGCAC GCGGTGACCT CTGCGGCGGG CATGGCGATG
GGCGGCCTGC ACCCGGTGGT CTGCGTGTAT TCGACGTTTC TCAACCGGGC GTTCGACCAG
GTGTTGATGG ACGTCGGCCT GCACGGCCTC CCGGTCACGT TCGTCCTCGA CCGCGCAGGG
ATCACCGGAG ATGACGGTCC GAGCCACAAC GGCATGTGGG ATCTGGCGAT TCTTTCCCTC
GTGCCGGGGA TGCGCATAGC TCTGCCGCGC GACGCCCGGC GGCTGCGCGA ATTGCTCCAC
GAGGTCCTCG CGGTGAGCGA CGGGCCGACC GCGATTCGTT TTCCTAAAGG CGAATTGCCG
GCCGACGTTG AGGCGGTGGA CCGGATCGGC GGTGTGGACG TGCTCCGGCA GGCGGACGAC
GCCGAGGTGC TGCTCGTCGG TTACGGGCCG ATGAGCCACG TCGCGTTGGA GGTCGCGGAC
CGGTTGGCCG CGCACGGTAT TTCCGCCACG GTGGTGGATC CGCGGTATCT GCTGCCGATG
GATCCGGCGC TGCTGACGCT CTGCGCGGCG TACGCGCTCG TGGTCACCAT CGAAGACAAT
TGCCGGCAGG GCGGGGCGGG AGCGACGCTC TCGCTCGCGT TGCGGGACAA GGGCGTGGAC
ACCCCGGTGC GCATTCACGC GATCCCGCAG CGCTACCTGG CGCACGGCAA GCGGGCGCAA
GTGCTCGCCG ACATCGGATT GTCCGCGCAG GACATCGCCC GCTCTGTGGT TGAAACCGTT
GCAAGCCTCG GCAGCCTCGA CCGTCAGCCG GTGATCGACT GA
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| Protein sequence | MAIGLLESVN TPEDLRALDH AQLTRLAGEI RDFLVQAVSR TGGHLGPNLG AVELTIALHR
VFDSPSEPIL FDTGHQAYVH KILTGRRDGF AMLRQRGGLS GYPSRAESEH DWIENSHAST
ALSYADGLAK ALALRGERRT VVAVVGDGAL TGGMCWEALN NIAAAKDRSI VIVVNDNGRS
YAPTIGGLAA HLNALRTNPN YEKVLARVKD VLSRTPLVGE ALYDTLHGIK KGLKDVLTPQ
GLFEDLGLKY LGPIDGHDIG AMEHAFLQAK RFGGPVIVHC VTRKGYGYAP AERDEVDHLH
GPGAFDPRTG KEMPKPRSWT AVFSEEIVRI GADRPDVVAL TAAMLHPVGL AEFAAAYPDR
VFDVGIAEQH AVTSAAGMAM GGLHPVVCVY STFLNRAFDQ VLMDVGLHGL PVTFVLDRAG
ITGDDGPSHN GMWDLAILSL VPGMRIALPR DARRLRELLH EVLAVSDGPT AIRFPKGELP
ADVEAVDRIG GVDVLRQADD AEVLLVGYGP MSHVALEVAD RLAAHGISAT VVDPRYLLPM
DPALLTLCAA YALVVTIEDN CRQGGAGATL SLALRDKGVD TPVRIHAIPQ RYLAHGKRAQ
VLADIGLSAQ DIARSVVETV ASLGSLDRQP VID
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