| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1373 |
|---|
| Symbol | |
|---|
| ID | 4485861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 1529641 |
|---|
| End bp | 1531983 |
|---|
| Gene Length | 2343 bp |
|---|
| Protein Length | 780 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639730157 |
|---|
| Product | malto-oligosyltrehalose synthase |
|---|
| Protein accession | YP_873131 |
|---|
| Protein GI | 117928580 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3280] Maltooligosyl trehalose synthase |
|---|
| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.424135 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCTCTA ACGCCGATTC GACACGTCGT CGCGGTCGGA CCCCCACCGC CACCTACCGG
ATTCAGCTGC GGCCGGATTT CGGGTTCGCC GACGTCGCCG CGCTGGCTTC ATATTTTGCC
GACCTCGGTG TCAGCCACGT CTACCTCTCC CCGGTCTTGG AGGCGGTACC CGGTTCCACG
CACGGGTACG ACGTCATCGA TCCGACCCGA TTGCGTCAGG AGTTCGGCGG CGAGGCCGCA
TTCACCGCGA TGCGCGAGGC GCTCGCCGCG GCCGGCGTCG GGATCGTGGT GGACATCGTG
CCAAACCACC TGGCGATTCC GGTGCCGGAG TGGCAAAATC CCGCGTTCTG GTCGGTGCTG
CGGGAAGGCC GGCACTCGCC GTTCGCGGCA TGGTTTGACA TCGACTGGGA CGCCGGCGAC
GGCCGGATCG TCTTACCGTT CCTCGACGGG CCATTGACCG AGAACCTCGG TCATTTCTCG
GTCGTCACCG ACGACGAGCA CGGCGCAATG CTCGCCTACT ATGACCATCG GTTCCCCCTT
GCCGCCGGCA CCGAACAGTT GCCCGTTGCC GAGGCGCTGG ACCGTCAGCA TTACCGGCTC
ATCGACTGGC GCGCCGGCCC GCAGGAGCGG AATTACCGGC GCTTCGTGGA CATCGATCAG
CTGATCGCCG TCCGGGTGGA CGATCCAACG GTGTGGGATG CGACGCACGC CGTCATCGTC
GACCTCGCCT GCCGCGAGCT GATTGACGGG CTCCGCATCG ACCACATCGA CGGGCTGCAC
GATCCGGCCG GATACCTCCG GCGACTGCAG AACGTGACCG GAGTGGACTG GGTCGTGGCC
GAGAAAATCC TCACGCTGAA CGAAGAACTC CCGGCCGACT GGCCGATCGC CGGGACCACC
GGATACGACG CCCTGGCGGT GCTGAACGGC CTGCTCATCG ATCCCGACGG TTATCGGCGG
ATTCGCCGGT GCTACGCCGA CCTTGCGCAC ATGACGGCCG AACGCACCGA GGTCGTCACC
GAGAGCAAAC GGGCGGCGCT TGCGGCTTTT GCCGGCGATA TCGAGCGATT GGCCGACGCG
CTCTCCGGTG AAGCCGGCTG TGCGCCTGCC GTCGCGCGGG ACCTCCTGCA CCGGATCCTC
CTGGACCTGC CCGTGTACCG GCCCTATCCG AGCGACCCGA CCAGCATGAC AGCGCTGCAC
GCCGCGGTCC GTCAAGCGGT GGGCGCACAC GCTGATGCGG CGGACTGCGC CCGGTTCCTG
GCGGCGGCGG TCCGCGACGG CCGGCCGGTC GGGGCGCGTT TTGGTCAGCT TGCCGCCGGG
GTTTACGCCA AGGGCGTGGA AGACACCGCC TTCTACCGGG ACATCGCTCT CCTCGCCGTG
AACGAGGTGG GGTGCGATCC ACGTCGTCCG AGTTGCTCGG TCGCCGAATT CCACGACTTC
ATGGCCCGGC TGGAAGCGCA CCATCCGACG ACGATGACGA CGCTCTCGAC GCACGACACC
AAGCGGTCGG AGGATGTCCG GGCCCGGCTC GCCGTCCTCT CCGAGCTTCC CGAGGAGTGG
GACACCTGTG TCCGCCGGCT CAGCACGCTC TCAACCGCGT TGGGCTGCCC CGACGAGCAC
GCCGCATACC TCGTCGTCCA GACCTTGGTC GGCGCGTGGC CGCTCGACCT GCGTCGCACC
GCAACCTACG TGCGCAAGGC ACTCCGGGAA GCAAAACGGG CCACCTCATG GCAGCATCCG
AATGCCCGGT ATGAATCCGC GGTGGCGTCA TACCTCGACG CGGTCTTCGC GTCGGCCGAT
TTTCTCGGCC GCATCGAGGA ATTCGTCAAC CGGCTCGCCC CGTACGGGCG CGCCAACAGC
CTGAGCCAGA AACTCCTCCA GCTCACGATG CCCGGCGTCC CGGACGTGTA CCAAGGGTGT
GAACGCACCT CGCTCCGGCT CGTCGACCCC GATAATCGGG CGCCGGTGGA CTTTGCCGCG
TGCCGGGCGG CATTGGACGA ATTCCTCGAC CCGAAAGTGC GGCTTACGGC CACCGTGTTG
CGGCTTCGCC GACGGCATCC GGAATGGTTC ACCGGCTACC ATCCGCTCGT CGCGGACGGC
CCGGCGGCCG ACCATCTGGT CGCGTTTCAC CGCGACGGTC CGGTCGTGAC AGTGGCCGGA
CGGCTCACCG CACGCCTTCG CGCCGCCGGC GGCTGGCGCG AGACGACGGT GCACATCCCC
GCCGGAACGT GGGTCGATGC GCTCTCCGGG CGGGAATGTG ACGGTGGAGA ACACGCAGTA
GGGAGCCTGC TGGGCGCCGC CCCGGTTGCG CTTCTCGTCC CGGCAGTGGA GGTCACGGCA
TGA
|
|---|
| Protein sequence | MSSNADSTRR RGRTPTATYR IQLRPDFGFA DVAALASYFA DLGVSHVYLS PVLEAVPGST
HGYDVIDPTR LRQEFGGEAA FTAMREALAA AGVGIVVDIV PNHLAIPVPE WQNPAFWSVL
REGRHSPFAA WFDIDWDAGD GRIVLPFLDG PLTENLGHFS VVTDDEHGAM LAYYDHRFPL
AAGTEQLPVA EALDRQHYRL IDWRAGPQER NYRRFVDIDQ LIAVRVDDPT VWDATHAVIV
DLACRELIDG LRIDHIDGLH DPAGYLRRLQ NVTGVDWVVA EKILTLNEEL PADWPIAGTT
GYDALAVLNG LLIDPDGYRR IRRCYADLAH MTAERTEVVT ESKRAALAAF AGDIERLADA
LSGEAGCAPA VARDLLHRIL LDLPVYRPYP SDPTSMTALH AAVRQAVGAH ADAADCARFL
AAAVRDGRPV GARFGQLAAG VYAKGVEDTA FYRDIALLAV NEVGCDPRRP SCSVAEFHDF
MARLEAHHPT TMTTLSTHDT KRSEDVRARL AVLSELPEEW DTCVRRLSTL STALGCPDEH
AAYLVVQTLV GAWPLDLRRT ATYVRKALRE AKRATSWQHP NARYESAVAS YLDAVFASAD
FLGRIEEFVN RLAPYGRANS LSQKLLQLTM PGVPDVYQGC ERTSLRLVDP DNRAPVDFAA
CRAALDEFLD PKVRLTATVL RLRRRHPEWF TGYHPLVADG PAADHLVAFH RDGPVVTVAG
RLTARLRAAG GWRETTVHIP AGTWVDALSG RECDGGEHAV GSLLGAAPVA LLVPAVEVTA
|
|---|
| |