Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1346 |
Symbol | |
ID | 4484771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1499234 |
End bp | 1499980 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639730126 |
Product | hypothetical protein |
Protein accession | YP_873104 |
Protein GI | 117928553 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.404537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.548466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGGGC ACTCGAAATG GGCCACCACC AAGCACAAGA AGGCGGTCAT CGACGCCAGG CGGGGCAAGC TCTTCGCCAA ATTGATCAAG AATATTGAGG TGGCGGCACG GGTCGGCGGA CCCGATCCCA ACGGCAACCC AACACTGGCC GACGCCATCG CCAAGGCCAG AGATCAATCG GTGCCGAATG ACAACATCGA ACGCGCGATC CGCCGGGGCG CCGGTCTCGA AGCCGGCGGC ACCGACTGGG AGCCGATCAT CTACGAAGGG TACGGCCCGG GCGGCGTCGC CCTGCTCATC GAATGCCTCA CCGACAACCG CAACCGGGCG GCGTCCGAAG TGCGCACGAC GATGACCCGC AACGGCGGGA GCATGGCCGA CCCCGGATCC GTGGCCTACC TGTTCAACCG GAAAGGGATC GTTATCGTCC CGAAGGAGGG TCGCAGCGAG GACGACGTCC TGGCGGCGGT TCTCGACGCC GGGGCGGAGG AGGTGAACGA CCTCGGCGAG TCCTTCGAGG TCGTGAGCGA ACCCGGCGAT CTCACCCGGG TGCGGGACGC GCTCTCGGCC GCCGGAATCC GCTACGAATC AGCGGACGTC GCGTGGCAGC CGACGGTGAA CGTGCCGCTC GATGACGACA CCGCCCGCAA GGTGCTCCGG CTCATCGAAG CGTTGGAAGA CTGCGACGAC GTGCAGGCGG TCTGGGCCAA CTTCGACATT TCCGACGCCG TGCTCGCCGA GGTCTGA
|
Protein sequence | MSGHSKWATT KHKKAVIDAR RGKLFAKLIK NIEVAARVGG PDPNGNPTLA DAIAKARDQS VPNDNIERAI RRGAGLEAGG TDWEPIIYEG YGPGGVALLI ECLTDNRNRA ASEVRTTMTR NGGSMADPGS VAYLFNRKGI VIVPKEGRSE DDVLAAVLDA GAEEVNDLGE SFEVVSEPGD LTRVRDALSA AGIRYESADV AWQPTVNVPL DDDTARKVLR LIEALEDCDD VQAVWANFDI SDAVLAEV
|
| |