Gene Acel_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1346 
Symbol 
ID4484771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1499234 
End bp1499980 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID639730126 
Producthypothetical protein 
Protein accessionYP_873104 
Protein GI117928553 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.404537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.548466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGC ACTCGAAATG GGCCACCACC AAGCACAAGA AGGCGGTCAT CGACGCCAGG 
CGGGGCAAGC TCTTCGCCAA ATTGATCAAG AATATTGAGG TGGCGGCACG GGTCGGCGGA
CCCGATCCCA ACGGCAACCC AACACTGGCC GACGCCATCG CCAAGGCCAG AGATCAATCG
GTGCCGAATG ACAACATCGA ACGCGCGATC CGCCGGGGCG CCGGTCTCGA AGCCGGCGGC
ACCGACTGGG AGCCGATCAT CTACGAAGGG TACGGCCCGG GCGGCGTCGC CCTGCTCATC
GAATGCCTCA CCGACAACCG CAACCGGGCG GCGTCCGAAG TGCGCACGAC GATGACCCGC
AACGGCGGGA GCATGGCCGA CCCCGGATCC GTGGCCTACC TGTTCAACCG GAAAGGGATC
GTTATCGTCC CGAAGGAGGG TCGCAGCGAG GACGACGTCC TGGCGGCGGT TCTCGACGCC
GGGGCGGAGG AGGTGAACGA CCTCGGCGAG TCCTTCGAGG TCGTGAGCGA ACCCGGCGAT
CTCACCCGGG TGCGGGACGC GCTCTCGGCC GCCGGAATCC GCTACGAATC AGCGGACGTC
GCGTGGCAGC CGACGGTGAA CGTGCCGCTC GATGACGACA CCGCCCGCAA GGTGCTCCGG
CTCATCGAAG CGTTGGAAGA CTGCGACGAC GTGCAGGCGG TCTGGGCCAA CTTCGACATT
TCCGACGCCG TGCTCGCCGA GGTCTGA
 
Protein sequence
MSGHSKWATT KHKKAVIDAR RGKLFAKLIK NIEVAARVGG PDPNGNPTLA DAIAKARDQS 
VPNDNIERAI RRGAGLEAGG TDWEPIIYEG YGPGGVALLI ECLTDNRNRA ASEVRTTMTR
NGGSMADPGS VAYLFNRKGI VIVPKEGRSE DDVLAAVLDA GAEEVNDLGE SFEVVSEPGD
LTRVRDALSA AGIRYESADV AWQPTVNVPL DDDTARKVLR LIEALEDCDD VQAVWANFDI
SDAVLAEV