| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1340 |
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| Symbol | secF |
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| ID | 4484765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | - |
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| Start bp | 1493116 |
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| End bp | 1494360 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639730120 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_873098 |
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| Protein GI | 117928547 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.265736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.609901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC TGGGTTCGAT CGGCCATGGC CTGTACACCG GGCAGATCTC CTTCGACTTC
GTCGGCCGCT GGCGCCGCTG GTTCACCCTC TCCGCCGTCG TCATCGTCAT CGGGCTGATC
GGTCTTGGCG TCCGCGGGTT GCACCTCGGC CTGGAATTCA AAGGTGGTAC CGAATTCACC
TTCCCGGACA AGGGATACTC CACATCCCAG GTTGCTGACG TGGTCAGCGG CGCAGGTGTC
TCGGATCCCG TCGTCCAGCA TTTGAGCCGG CCCGGCGTGG GTGGCGCCAC CTTCCAGGTG
CAGACCAAGG CCCTGGACAA GTCCGCGTCC GACGCTGTTA TCAAGGCCAT CACGACGAAA
CTCGGTGTTC CGGCCGACGA GGTTTCCACG ACGACCGTCG GGGCGAGTTG GGGCAAACAA
ATCACCAATA AGGCGGTCGA GAGCCTGATC GTCTTTCTGG TGGCGGTCGT CCTTTACCTG
ACGCTGTTCT TTGAATGGAA GATGGCGATC AGCGCGATCA TTGCGCTGCT GCACGACCTC
ATCATCACTG TGGGCATCTA CGCCCTGGTC GGCTTCGACG TCACCCCGGC GACGGTGATC
GGTCTGCTGA CCATTCTCGG ATATTCGCTG TATGACACCG TCGTTGTTTT CGACAAGGTC
CGGGAGAATA CCCGGGGGAT CGCCGGCGGG AGCCGGATGA CCTACAGCCA AGCGGCGAAC
CTCGCCGTGA ACCAGACCCT CGTCCGGTCC ATCAACACCT CGGTCATCGC GCTGCTCCCG
GTCGCCTCGC TGCTTTTCGT CGGTGCGGGC CTGCTCGGCG CCGGTTCCCT CAAAGACCTC
GCCCTCGCCC TCTTTGTCGG CCTGGCCACC GGAACCTACT CCTCAATTTT TGTCGCCACC
CCGATCCTCA CCCTGCTGAA GGAACGCGAG CCGCAATTTC GGGCGTTGGC GAAGCGGGTC
GCCACTCGGT ACGGCGGACA GGTTCCGGCA ACCGTGCCGG TCGCTGTCGC GGCCGGCGGA
GGTACTGTGA CGGCGGCGAT CGACCCGGCC GCCGGTTCAC CCTCGGCACA TGGGCAAACT
CCGGCACCGG GTGACGCGTC CCGCCGCGAC GCTCCGGCCG ACGACGGCGA CGACGGCGAC
GGTACGCCGT CCGCGCAGCC GATCGCCAGC GGGGCGGTGA TTCGACGCCA GCAGGCGAAT
GCGCGCCGGC GCGGGCGTCC GTCCAGCAAG AAACGCCGAC GCTGA
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| Protein sequence | MSKLGSIGHG LYTGQISFDF VGRWRRWFTL SAVVIVIGLI GLGVRGLHLG LEFKGGTEFT
FPDKGYSTSQ VADVVSGAGV SDPVVQHLSR PGVGGATFQV QTKALDKSAS DAVIKAITTK
LGVPADEVST TTVGASWGKQ ITNKAVESLI VFLVAVVLYL TLFFEWKMAI SAIIALLHDL
IITVGIYALV GFDVTPATVI GLLTILGYSL YDTVVVFDKV RENTRGIAGG SRMTYSQAAN
LAVNQTLVRS INTSVIALLP VASLLFVGAG LLGAGSLKDL ALALFVGLAT GTYSSIFVAT
PILTLLKERE PQFRALAKRV ATRYGGQVPA TVPVAVAAGG GTVTAAIDPA AGSPSAHGQT
PAPGDASRRD APADDGDDGD GTPSAQPIAS GAVIRRQQAN ARRRGRPSSK KRRR
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