Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1334 |
Symbol | aspS |
ID | 4485171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1484924 |
End bp | 1486702 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639730114 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_873092 |
Protein GI | 117928541 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.455738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.523529 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCCGGA CGCACGAAGC CGGGACGTTG CGGCCGGCGG ACGCCGGCAG CCGGGTCGTG CTCGCCGGCT GGGTCGCCCG GCGTCGTGAC CTCGGTGGAG TGGTCTTCCT CGACCTGCGG GACGCCTCCG GCATCGTCCA GGTTGTGGCG CGCGAGGGCG TCGCCGGGCA GGTGGCGTCC CGGGTGCGGG CGGAATTCTG CCTCCGGGTG GCAGGCGAAG TGCGGCTGCG TCCGGCGGGC AATGAGAACC CGGAGCTCGA GACCGGGGAC GTCGAGGTGG TGGCCGACGA GATCGAGGTG CTCTCGGAGG CGGCGCCGCT GCCGTTCCCG GTGACCGGTC CGGTGGAGGT GAACGAGGAG ACCCGGCTGA AATACCGGTA CCTCGACCTG CGGCGTCCCG GACCGGCCCG GGCGTTGCGG CTCCGGTCGG AGATGAACCG GCTGGCTCGT GAGGTGATGG CCCGGCACCG GTTCGTGGAG GTGGAGACGC CGTACCTTAC TCGCTCCACG CCGGAAGGGG CGCGGGATTT CCTCGTGCCG GCCCGGCTGC AGCCCGGGCA TTGGTACGCG CTTCCGCAAT CCCCGCAATT GTTCAAGCAA TTGCTGATGG TGGCCGGGCT GGAGCGGTAT TACCAGCTGG CCCGGTGTTT CCGGGATGAG GATTTCCGGG CCGACCGCCA ACCGGAATTC ACCCAGCTGG ACATTGAGAT GAGTTTCGTC ACCGAGGACG ACGTCATGGC GCTCGCCGAG GACGTCATCG CCACGCTGTG GAGCCAGCTC GCCGGGGTGG AGCTTGCCCT CCCGTTGCCG CGGCTCACGT ACGCCGAGGC GATGCGCCGA TTCGGTTCCG ACAAACCGGA TTTGCGGTTC GGCCAGGAAA TTGTCGACCT CACGAAATTC TTTGCCGGCA CCTCGCTGCG GATTTTCCAG GCCCCTTACG TCGGCGCCGT GGTGATGCCG GGCGGTGCGG GTCAGAGCCG ATCTGAGCTG GACGAATGGA CGACGTTCGC CCGCTCCCGC GGCGCGAAGG GACTCGCGTA CGTTCTCGTC GGTGCGGAGC TCACCGGGCC GATCGCCAAG AACCTCTCCG ACGCCGAACG TGCCGGGCTT CCCGCTGCGA CCGGCGCCCG GCCCGGTGAC GCGATTTTCT TCGCCGCCGG AGAGCAGCGG GCGAGTCAGG AACTCCTCGG CGCCGTCCGG CTGGAGATCG CCCGCCGGTG CCGGTTGACC GACCCGGCGT CCGGCGCGCC GGCGTGGTCG CTGTGCTGGA TCGTCGACCC GCCGTTGTTC GAGCCGGACG GCGCCGGCGG TTGGACCTCG GTGCACCACC CGTTTACCGC GCCGAAGCCG GAGTGGATGG ACCGGTTCGC CGACAAACCC GGGGAGGCGC TGGCGGCGGC GTACGACATC GTCGCCAACG GCAACGAGAT CGGCGGTGGT TCGATCCGTA TCCACCGGGC CGATGTCCAG CAGCGGGTGT TCGAGGTCCT CGGCATTTCC GAAGCGGAGG CGAACGCGAA GTTCGGCTTC CTCTTGGAGG CCTTCCGGTA CGGGCCGCCT CCGCACGGTG GGATCGCCTT CGGGTGGGAC CGGATCGCCG CTCTGCTCGC CGGTGTGGAG TCGATCCGGG ACGTGATCGC GTTTCCGAAG ACCGCGTCCG GCACCGACCC GCTCACCGGA GCTCCGACGC CGATCACTCC AGAGCAGCGG AAGGAGGCCG GCATCGACGC CGACCCGTAC GCCGCCGCAG GCCGGCCGCC GGGGAGGCAA TCCGCGTAG
|
Protein sequence | MIRTHEAGTL RPADAGSRVV LAGWVARRRD LGGVVFLDLR DASGIVQVVA REGVAGQVAS RVRAEFCLRV AGEVRLRPAG NENPELETGD VEVVADEIEV LSEAAPLPFP VTGPVEVNEE TRLKYRYLDL RRPGPARALR LRSEMNRLAR EVMARHRFVE VETPYLTRST PEGARDFLVP ARLQPGHWYA LPQSPQLFKQ LLMVAGLERY YQLARCFRDE DFRADRQPEF TQLDIEMSFV TEDDVMALAE DVIATLWSQL AGVELALPLP RLTYAEAMRR FGSDKPDLRF GQEIVDLTKF FAGTSLRIFQ APYVGAVVMP GGAGQSRSEL DEWTTFARSR GAKGLAYVLV GAELTGPIAK NLSDAERAGL PAATGARPGD AIFFAAGEQR ASQELLGAVR LEIARRCRLT DPASGAPAWS LCWIVDPPLF EPDGAGGWTS VHHPFTAPKP EWMDRFADKP GEALAAAYDI VANGNEIGGG SIRIHRADVQ QRVFEVLGIS EAEANAKFGF LLEAFRYGPP PHGGIAFGWD RIAALLAGVE SIRDVIAFPK TASGTDPLTG APTPITPEQR KEAGIDADPY AAAGRPPGRQ SA
|
| |