Gene Acel_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1320 
Symbol 
ID4486373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1468890 
End bp1470119 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content62% 
IMG OID639730100 
Producttype II secretion system protein 
Protein accessionYP_873078 
Protein GI117928527 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0145546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA CCTACCAGTA CTCCGTTCGG GACCGCAGCG GAAAACTGCT CACCGGCACG 
CTGGCTGCCG ACAGTGAAAC AGCGGTCGCG CAACGACTCC GCGCGATGGG TTTCGCCCCC
ATCAGCATCA ACGTGGCGAA TGCGGGTCTG AAGAAAGAAA TCAGCATTCC CGGCTTCGGC
AACCGGGTGA AGATGAAGGA CCTGGCGGTG ATGTCCCGCC AGTTCGCCAC AATGATCAAC
TCCGGGCTCT CGTTGCTGCG GGCACTAACC ATCCTGCGGG AGCAGACACA GAGCAAGGCG
TTGCAGAAGG TCCTCACCGA GGTCCGCAAT GACGTCGAAA CGGGGAGCTC CCTGTCGGCG
GCGATGAGCA AGCATCCCAG GGCGTTTCCG CCGCTCATGG TGAATATGAT CCGCGCCGGT
GAGGTCGGCG GGTTCCTCGA CTCCGTCCTG TTGGAGATCG CCGCGAATTA TGAGGCGGAG
GTGAAACTCC GGAGCAAGGT GAAGTCGGCG ATGACCTATC CGGTCGTCGT GCTCTGCATT
TCGCTGCTCG CGGTGCTCGG CATGCTCACC TTCGTCGTCC CCGTCTTCGC GAAGATGTTC
AAACAGCTGG GCGGCAAACT GCCGGCGCCG ACGCAGTTCC TGGTCACCCT CTCGCACAGC
ATGAAAGTGC TGTTACCGGT GCTCATCGTG CTGGCGATTG TCGGCGGGAT TACGTGGTCG
CGGATTCGGC GGACCGAAGC GGTCCGCAAC GTCGTTGACC CCTTCAAGTT GAAGGTGCCG
ATTTTCGGGC AGCTCTTCCG CAAGCTCGCC CTTGCCCGGT TCGCCCGCAA CCTGGGCACG
ATGATGCACT CCGGCGTGCC GATCCTGCAG GCCCTGGATA TCGTCGCTGA CACCACCGGG
AATGTCGTGC TCGCTCGGGC GATCCGCGAC GTGCAGGGCA GCATCCGGAG CGGGGAATCC
TTGACCGCGC CGCTCACGTC ACACCCCATC TTTCCGCCCA TGGTGGTGCA GATGATGGCG
GTCGGTGAGG ACACCGGCGC GCTCGACACC ATGCTCGGGA AGATCGCGCA GTTTTACGAC
CAAGAGGTCG AAGCCATGAC CGAATCGCTG ACCGCCCTCA TTGAGCCGAT CATGATTGCT
CTGCTCGGCG GCATCGTCGG CTCCATGATC GTCGCACTGT ATCTGCCGAT CTTCCACATC
TACGACCTGG TCTCCGGTTC GGGCGGCTGA
 
Protein sequence
MTATYQYSVR DRSGKLLTGT LAADSETAVA QRLRAMGFAP ISINVANAGL KKEISIPGFG 
NRVKMKDLAV MSRQFATMIN SGLSLLRALT ILREQTQSKA LQKVLTEVRN DVETGSSLSA
AMSKHPRAFP PLMVNMIRAG EVGGFLDSVL LEIAANYEAE VKLRSKVKSA MTYPVVVLCI
SLLAVLGMLT FVVPVFAKMF KQLGGKLPAP TQFLVTLSHS MKVLLPVLIV LAIVGGITWS
RIRRTEAVRN VVDPFKLKVP IFGQLFRKLA LARFARNLGT MMHSGVPILQ ALDIVADTTG
NVVLARAIRD VQGSIRSGES LTAPLTSHPI FPPMVVQMMA VGEDTGALDT MLGKIAQFYD
QEVEAMTESL TALIEPIMIA LLGGIVGSMI VALYLPIFHI YDLVSGSGG