Gene Acel_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1314 
Symbol 
ID4485469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1462614 
End bp1463402 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID639730094 
Productpeptidase A24A domain-containing protein 
Protein accessionYP_873072 
Protein GI117928521 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.410004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0147639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTGA CGCACGCCCT TGAGTTCGCC ATCGCCGCGG CGTTCGGCGC TATCGTCGGT 
TCTTTCCTCA ACGTCGTGAT CTGGCGGCTG CCGCGGGGAG AATCGATCAT CCGCCCTCGG
TCGAGATGCA TCTCCTGCGG CGAGGCGATT CGACCGCGGG ACAATGTGCC GATCGCCGGC
TGGCTGCTGC TGCGCGGCCG GTGCCGCAGC TGCGGTGCGC GCATCCCGGT CCGGTATCCG
CTCGTCGAAG CCCTGACCGC GGGACTCTTC ATTCTCGGCC TGTGGCGGTT CGGTCTCAGT
TGGGAGATGG CGTCGTTCTG GTATCTGAGC GCGGTTGGGG TCGCGCTCGC GTACATCGAC
CTCGACACCC ACCGGCTGCC GGATCGGCTG ACCCTACCGT CGTACGCCGT CGCCGCCGCG
CTTCTTGGCG TCGCGGCGGT GACGCGGCAT CGCCCCGAGC GCATGCTGCT CGCTCTCCTT
GGCATGGCCG TGATGTACGG CTTCTTCTTC CTGCTTATGG TGATCAAGCC GGGCGGCATG
GGCTTCGGTG ATGTCAAACT TTCCGGAGTC CTGGGACTTT ACCTCGGTTA TCTCGGGCTC
GGGATCCTCT TTGTCGGTGC GTTTCTTGCG TTCCTTCTCG GCGGTCTCGC CGCTGTCGGT
GCGCTTGTCC GGCGCCGGGC GACCAGACAC AGCACGATTG CCTTTGGGCC GGCACTCGTC
GCCGGCGCAC TGGCGGCAGC CCTCTTCGGG GGAGCGATCG TGCATGCCTA CACGGGAATG
CTTGCCTAA
 
Protein sequence
MTVTHALEFA IAAAFGAIVG SFLNVVIWRL PRGESIIRPR SRCISCGEAI RPRDNVPIAG 
WLLLRGRCRS CGARIPVRYP LVEALTAGLF ILGLWRFGLS WEMASFWYLS AVGVALAYID
LDTHRLPDRL TLPSYAVAAA LLGVAAVTRH RPERMLLALL GMAVMYGFFF LLMVIKPGGM
GFGDVKLSGV LGLYLGYLGL GILFVGAFLA FLLGGLAAVG ALVRRRATRH STIAFGPALV
AGALAAALFG GAIVHAYTGM LA