| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1307 |
|---|
| Symbol | aroB |
|---|
| ID | 4485462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 1456217 |
|---|
| End bp | 1457302 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639730087 |
|---|
| Product | 3-dehydroquinate synthase |
|---|
| Protein accession | YP_873065 |
|---|
| Protein GI | 117928514 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0337] 3-dehydroquinate synthetase |
|---|
| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0261081 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGG TGGTCCGGGT CGGTGGCGAA GCGCCGTACG ACGTGCGCAT CGGCCGGGGC
GTGCTGGCCG AGCTCGACAC GCTGGTGCCA GCCGTCGTCC GCCGGGTCGC CGTCCTCCAT
CAGCCGACCG TCGCGTCCGT GGCGGACCGG ATCGCCGCCG GTCTTGCCGC CCCGAACCGT
GAGGTCTCGC TCTTCCCCTT GCCGGACGGC GAGGCGGCCA AGACCGTGGC CACGGCCGCG
AACCTCTGGG ACGGCCTGGC GTCCGCCGGC TTCACCCGCA CGGATCTGAT CATCGGAGTC
GGCGGGGGGG CGGCGACCGA CCTCGCCGGT TTCGTTGCGG CGACCTGGCT GCGCGGGGTG
GACGTCGTCC AGGTGCCCAC CACTCTCGCC GGGATGGTCG ATGCTGCGAT CGGCGGAAAG
ACCGGAATCA ACCTGGACGC CGGCAAGAAC CTCGTCGGCG CCTTTCACCC GCCCCGCGCG
GTGCTCTGCG ACGTCGGGCT CCTGGCCACC GTGCCGCCGG CGGACTACGC CGCCGGTCTG
GCTGAAGTGA TTAAAACCGG GTTCATCGCC GATCCGGTGA TCCTCGAACT CGTCGAGGCG
GACCCGGCAG CCGCCCGGAC GCCGGCCGGC CCGCACACCG AAGAGCTCAT CGTCCGGTCG
GTGGCGGTGA AGGCGGCCGT GGTCGCCGCC GACCTTCGCG AGCGGATCGG CACCCAACTC
GGCAGGGAAG TGCTGAACTA CGGGCACACC CTTGGCCATG CGATCGAGCG CCGGGAGCAG
TACCGGTGGC GGCACGGCGA CGCGGTAGCG GTCGGCCTGG TGTTCGCCGC TGCGCTGGCC
CGTCATGCTG GGCTGCTGGA CGACGCCACC GCCGAGCGGC ACCGGCGCAT CCTGTCCGCC
GTCGGTCTGC CGACCCGGTA TCCGAAGGAA GCCTGGCCGG AACTCCGCGC TGCGATGGCG
ATCGACAAGA AGGCCCGGGG GAGCACGCTG CGGTTCGTCG TCCTGGAAGC GATCGGCCGG
CCGCGCATCC TTGCCGATCC CGATCCGGCC GTCCTGGAGG CCGCCTACGC GGAGGTAGCC
GAATGA
|
|---|
| Protein sequence | MTQVVRVGGE APYDVRIGRG VLAELDTLVP AVVRRVAVLH QPTVASVADR IAAGLAAPNR
EVSLFPLPDG EAAKTVATAA NLWDGLASAG FTRTDLIIGV GGGAATDLAG FVAATWLRGV
DVVQVPTTLA GMVDAAIGGK TGINLDAGKN LVGAFHPPRA VLCDVGLLAT VPPADYAAGL
AEVIKTGFIA DPVILELVEA DPAAARTPAG PHTEELIVRS VAVKAAVVAA DLRERIGTQL
GREVLNYGHT LGHAIERREQ YRWRHGDAVA VGLVFAAALA RHAGLLDDAT AERHRRILSA
VGLPTRYPKE AWPELRAAMA IDKKARGSTL RFVVLEAIGR PRILADPDPA VLEAAYAEVA
E
|
|---|
| |