Gene Acel_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1304 
Symbol 
ID4485459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1454601 
End bp1455038 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content67% 
IMG OID639730084 
ProductNusB antitermination factor 
Protein accessionYP_873062 
Protein GI117928511 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.592114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0232631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCGC GAACCAAGGC CCGCAAGCGC GCCCTCGACG TGCTCTTCGA AGCTGACCTA 
CGTGCCGCCG ATCCGCTCGA GATCCTTGCT GATCACACGG CCCGGGCTGA CACGCCAGTC
CCGGAGTACG CGGTTCGGTT GGTCGAAGGA GTCGCAGCGC ATCGAGCCGA GATCGATCGG
ATCATCGAAC AGTTCGCGGT CGGCTGGACC CTGCAGCGGA TGCCCACGGT CGACCGCAAC
ATCCTCCGGC TCGCGATCTA CGAGCTGCTC TGGGTCACCG AGGTTCCGGA CGCCGTTGTG
CTGGCCGAGG CGGTGAAGCT GGCCCAGGAC CTCTCAACGG CCGAGTCGGC GCCGTTCGTC
AACGGCGTAC TCGCCGCTGT ACGGGCGAAC CAGGCGACGG TTACAGCGAG TCCACCGCCC
GGCGAGCCTC CGGATTGA
 
Protein sequence
MPARTKARKR ALDVLFEADL RAADPLEILA DHTARADTPV PEYAVRLVEG VAAHRAEIDR 
IIEQFAVGWT LQRMPTVDRN ILRLAIYELL WVTEVPDAVV LAEAVKLAQD LSTAESAPFV
NGVLAAVRAN QATVTASPPP GEPPD