Gene Acel_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1292 
Symbol 
ID4485633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1442089 
End bp1442352 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content62% 
IMG OID639730072 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_873050 
Protein GI117928499 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.336448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0745761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGGAA CCGTCGCCGT CCCTGAGGGA ATCACGAATC CGCCGATTGA CGAGCTGCTC 
AAGGTCTGTG ACAACAAGTA CGCGCTGGTG ATCTACGCGG CGAAGCGGGC TCGTCAGATC
AACGCGTACT ACGCCCAGCT TGGCGAGGGA CTGCTGGAGT ATGTCGGACC GCTCGTCGAA
ACGTATCCGA CGGAGAAACC GCTCTCCATC GCACTGCGCG AGATCAACGC GGGTCTGCTC
ACCGCCGAGC CGATCGAGCA GTAG
 
Protein sequence
MAGTVAVPEG ITNPPIDELL KVCDNKYALV IYAAKRARQI NAYYAQLGEG LLEYVGPLVE 
TYPTEKPLSI ALREINAGLL TAEPIEQ