Gene Acel_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1288 
Symbol 
ID4485629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1436276 
End bp1437394 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content71% 
IMG OID639730068 
ProductL-alanine dehydrogenase 
Protein accessionYP_873046 
Protein GI117928495 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0686] Alanine dehydrogenase 
TIGRFAM ID[TIGR00518] alanine dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.109562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0699401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GGGTGCCCCG GGAGATCAAA CCGCAGGAGT ACCGGGTCGC GCTGACGCCG 
ATCGGAGTCC GGGAACTTAC CGACGCCGGT CATACCGTTC TCGTCGAGCA CGACGCCGGC
GCCGGTTCGG CCATCCCAGA CGTCGAATAC CACGCGACCG GCGGGACGAT CGTGCCGACC
GCTGACGACG TCTGGGCGGA AGCGGACCTC ATCGTCAAGG TGAAGGAACC GATCGCCGAG
GAATACCCGC GGCTTCGCCG GGGACAGCTC CTCTTCACCT TCCTCCACCT CGCGGCGTCC
GCCGAGTGCA CCTCGGCGCT GCTTGCCGCC GGGGTCACCG CGATCGCCTA CGAGACGGTC
CGGCTGCCGG ACGGCCGGCT GCCGCTCCTC GCGCCGATGA GTGAGATCGC CGGACGGCTC
GCCGTACAGG AGGGCGCGTA CCACCTCAAG CGGACTGCGG GAGGTCGCGG CATCCTCCTC
GGTGGCATGC CCGGCGTCCC CCCCGCCACC GTCGTCGTCC TGGGCGCCGG GGTGGCGGGC
AGCCAGGCCA CCGAAATCGC GGTCGGTCTG GGCGCGCGGG TCGTCGTCCT CGACACCAAC
CTGGAGAAAC TCCGCCACGT TTACGCGACG TACCACGGCC GGGTGGAGAC GCTCGCCGCC
CGGCGGCACA CCATCGTGCA GGCCTGCCGC GAAGCTGACC TCGTCATCGG AGCGGTCTTG
GTCCCCGGAG CCCGGGCCCC CATTCTCGTC GACAAGGAGA CCATCGCGGA GATGCGGCCG
GGTTCGGTGC TCGTCGACGT CTCGATCGAC CAGGGCGGCT GCTTCGCACC GAGCCGGCCC
ACCACCCATG CCGACCCAAC CTTCCCGGTG GCCGACAGCC TCCTCTACTG CGTCGCGAAC
ATGCCCGGGG CCGTGCCCCG CACCGCCACG TACGCGCTCA CCAACGCCAC CCTGCCCTAC
GTCGAGGCCA TCGCGAACCT CGGGCTTGCC GCCGCCTGCG AGCATTTCCC CGAGCTCACG
GCCGGTATCA CCACCGTCGC CGGACGGCTG ACCGCCCCGG AGGTCGGCCA GGCCCACGGT
CTACCGGTGA CCCCACTCGC CGAGGCCCTC GCCCGGTAA
 
Protein sequence
MRIGVPREIK PQEYRVALTP IGVRELTDAG HTVLVEHDAG AGSAIPDVEY HATGGTIVPT 
ADDVWAEADL IVKVKEPIAE EYPRLRRGQL LFTFLHLAAS AECTSALLAA GVTAIAYETV
RLPDGRLPLL APMSEIAGRL AVQEGAYHLK RTAGGRGILL GGMPGVPPAT VVVLGAGVAG
SQATEIAVGL GARVVVLDTN LEKLRHVYAT YHGRVETLAA RRHTIVQACR EADLVIGAVL
VPGARAPILV DKETIAEMRP GSVLVDVSID QGGCFAPSRP TTHADPTFPV ADSLLYCVAN
MPGAVPRTAT YALTNATLPY VEAIANLGLA AACEHFPELT AGITTVAGRL TAPEVGQAHG
LPVTPLAEAL AR