Gene Acel_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1269 
Symbol 
ID4486340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1416305 
End bp1416982 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID639730049 
Producttranslation initiation factor 3 
Protein accessionYP_873027 
Protein GI117928476 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.628011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.508823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGGCC CGGCGGATCG GCGATCCGCT GAACCGGCGC CGGTGGAACA GCGCCAAGCG 
ATCAATTGCC CAGGAGGAGG TCCCATCAGC GTCGAACCCC GTATCAACGA CCAGATTCGT
GCCCCTGAGG TGCGACTCGT CGGTCCCAAT GGCGAGCAAG TCGGCATCGT CCGCATTGAA
GATGCCCTGC GGTTGGCCGA AGAAGCTGAC CTTGACCTGG TGGAGGTCGC ACCGATGGCG
CGGCCGCCGG TGGTCAAGCT CATGGACTAC GGCAAGTTCA AATACGAATC CGCGGTCAAG
GCCCGGGAGG CCCGCAAGCA CCAGGCTCAG ACCGTGATCA AAGAGATGAA GCTTCGGCCC
AAGATCGATA ATCACGATTA CGAGACGAAG AAGAACCATG TTGTCCGATT CCTCAACGAG
GGTGACAAGG TAAAGATCAC TATCATGTTC CGAGGCCGGG AGCAGTCCCG CCCGGAGATG
GGACTCCGCC TCCTCCAACG GCTGGCCGAG GATGTCGCCG ACCTGGGGTA CGTCGAAGCG
GCTCCGAAGC TTGATGGCCG GAACATGACC ATGATCTTGG GCCCGCACAA GAAGAAGTCC
GAGTACCGTG CGGAGCGGGC TCGGGAGCTC GCCGCGCGGG CGGCGGAGAA GGCCGCTGAA
CGGGGTGCCG GGCAGTAG
 
Protein sequence
MVGPADRRSA EPAPVEQRQA INCPGGGPIS VEPRINDQIR APEVRLVGPN GEQVGIVRIE 
DALRLAEEAD LDLVEVAPMA RPPVVKLMDY GKFKYESAVK AREARKHQAQ TVIKEMKLRP
KIDNHDYETK KNHVVRFLNE GDKVKITIMF RGREQSRPEM GLRLLQRLAE DVADLGYVEA
APKLDGRNMT MILGPHKKKS EYRAERAREL AARAAEKAAE RGAGQ