Gene Acel_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1254 
Symbol 
ID4485154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1399895 
End bp1401175 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content68% 
IMG OID639730034 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_873012 
Protein GI117928461 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.166593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCATC TTCTGGACGA TCTCGCCTGG CGCGGGCTCA TCGCGCAGAG CACCGACCTC 
GAGGCACTCC GGGCCGCGAT GAACACCGGT CCGATCACCG TGTACTGCGG TTTCGATCCG
ACGGCGCCGA GCCTGCACAT CGGTCATCTC GTGCAGATCC TCACCCTGCG CCGCTTTCAG
GACGCCGGTC ACCGACCGAT CGCGCTGGTC GGCGGTGCAA CCGGCTTGAT TGGTGATCCG
TCCGGGCGGA CGACGGAGCG TGCGCTCAAT GATCCCGATG TGGTGGCCGG GTGGGCGGAG
CGGATTCACC GCCAACTCGC GCCGTTCCTC GACTTCACCG GGGAACGGGC CGGCCAACCG
GCCATCGCGG TGAACAATCT CGAGTGGACG GGCCGGCTGA CGGCGATCGA GTTTCTCCGC
GACGTCGGCA AGCATTTCCG GGTCGGCCGC ATGCTGGCCA AGGAGGTCGT GGCCGCCCGC
CTGCGCTCCG AGCAGGGCAT CAGCTATACC GAGTTCAGCT ACCAAATCTT GCAGAGCCTG
GACTTCCTGG AGCTCTACCG GCGGTACCGG TGCGTCCTGC AGATCGGCGG AATCGATCAG
TGGGGGAACC TCACCTCCGG TATCGAGCTC ATCCACAAGG TGGAAGGGGT CGACGTCCAC
GCGCTGGCGA CCCCGCTGGT GACGAAGGCG GATGGGACCA AATTCGGCAA GACGGCGGGC
GGCGCCGTCT GGCTGGACCC CGCGTTGACC TCGCCGTACG CGTTCTACCA GTTCTGGATC
AATACGGATG ACCGTGACGT GCCGGCGTAC CTGCGCTACT TCAGCTTGAA GAACAAGGAC
GAACTGGAGG CCTTGGAGAA GGACGCGGGC CGGGACCCCG CCGCCCGCCT GGGACAGCGG
GCGCTGGCCG AAGAGCTGAC CACCCTGGTT CACGGCGCGA CGGAGTGCGG CAAGGTCGTC
GCGGCTAGCG CGGCGCTCTT TGGCCGCGGG GAGCTCGCGG GTGTCGAGCC GGAAACGCTC
GCCGCCGCTC TTGCAGAAGC CGGCTTGGTC ACGATGCCGT TCGATCCGCC ACCCCGGGTG
GTCGACGCCT TGGTCGCGAC CGGACTGGTG GAGTCGCGTT CGGCGGCCCG CCGGGTCATC
AGCGAGGGCG GGGCGTACGT GAACAACGAG AAGGTGACGG ACGTCGACGC CCAGATTGAC
CCAGGACGGT TGCTCCACGG CCGGTGGGCG GTGATTCGCC GCGGACGCCG CGCGGTCGCC
GGCGTTGAGC GCGCTGGGTG A
 
Protein sequence
MTHLLDDLAW RGLIAQSTDL EALRAAMNTG PITVYCGFDP TAPSLHIGHL VQILTLRRFQ 
DAGHRPIALV GGATGLIGDP SGRTTERALN DPDVVAGWAE RIHRQLAPFL DFTGERAGQP
AIAVNNLEWT GRLTAIEFLR DVGKHFRVGR MLAKEVVAAR LRSEQGISYT EFSYQILQSL
DFLELYRRYR CVLQIGGIDQ WGNLTSGIEL IHKVEGVDVH ALATPLVTKA DGTKFGKTAG
GAVWLDPALT SPYAFYQFWI NTDDRDVPAY LRYFSLKNKD ELEALEKDAG RDPAARLGQR
ALAEELTTLV HGATECGKVV AASAALFGRG ELAGVEPETL AAALAEAGLV TMPFDPPPRV
VDALVATGLV ESRSAARRVI SEGGAYVNNE KVTDVDAQID PGRLLHGRWA VIRRGRRAVA
GVERAG