Gene Acel_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1247 
Symbol 
ID4486695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1388404 
End bp1389207 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content71% 
IMG OID639730024 
Producthemolysin A 
Protein accessionYP_873005 
Protein GI117928454 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.68471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCC GGCGACGACT CGATCGTGAG CTTGTCCGAC GCGGGCTGGC CCGGTCACGG 
TCCGAGGCGG CCGATCTCGT TGCCAGCGGG GCGGTTCTGG TGGCCGGACG CCCGGCGATG
AAGCCTGCGA CGGCGGTGAG CCCCCAGGAT TCCCTGACTC TCCGGAGCCG GCAGCACCGG
TACGCCTCCC GGGGCGGCGA GAAGCTGGCG CCGGTACTGG CCGGATTCAT CGCCCGCGGC
CTGGCCGTAG CCGCCCGGCG CTGCGTGGAT GCCGGCGCAT CCACCGGCGG GTTCACCAGC
GTGCTCCTAG AGCACGGCGC GGCGGAAGTT TTCGCCGTGG ACGTCGGATA CGGACAGTTG
GCATGGTCGC TCCGCAACGA CCCACGGGTT CGCGTTCTGG AACGCACCAA CATTCGCTCG
ATCACGCTGG CTCACGTCGA TGGGCGCCCG GTGGACCTTG TCGTCGGGGA CCTGTCGTTC
ATCTCGCTCA CCCTGGTACT TCCGGCGCTG GTCGGCATTG CCCGTCCCGA CGCCGACTTC
GTCCTGCTCG TCAAACCGCA ATTCGAGGTC GGCCGGGACC AGGTCGGCGC CGGCGGCGTG
GTCCGTGCTC CGCAGGCCCG TGCGGCGGCG ATCCGGAAGG TCACCGACGC CGCACACGGG
CTGGGTCTCG GCACCATCGC GGCTGTGCCG AGCCCGCTTC GTGGGCCGGC CGGAAACCGG
GAGTACTTCG TGTGGCTTCG GGCCGGGGCG CCGCCGCTGG ACGATGCCGA CCTCGCCGCT
CTCGTCGCGG GGGAGCCGGC GTGA
 
Protein sequence
MTSRRRLDRE LVRRGLARSR SEAADLVASG AVLVAGRPAM KPATAVSPQD SLTLRSRQHR 
YASRGGEKLA PVLAGFIARG LAVAARRCVD AGASTGGFTS VLLEHGAAEV FAVDVGYGQL
AWSLRNDPRV RVLERTNIRS ITLAHVDGRP VDLVVGDLSF ISLTLVLPAL VGIARPDADF
VLLVKPQFEV GRDQVGAGGV VRAPQARAAA IRKVTDAAHG LGLGTIAAVP SPLRGPAGNR
EYFVWLRAGA PPLDDADLAA LVAGEPA