Gene Acel_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1244 
Symbol 
ID4486692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1384354 
End bp1385577 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content71% 
IMG OID639730021 
Producthypothetical protein 
Protein accessionYP_873002 
Protein GI117928451 
COG category[S] Function unknown 
COG ID[COG4825] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.745581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.686905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGG CGTTGGGATT TCGACGTCGT CAGGCTGAGC ACGTCGGCGT GGTCGGCATT 
GCGCGGATCG ACCGCGACCT CCGCCGTCTC GCCGCGCGAT TACAACCAGG TGACATTGCC
GTCATCGACC AGCTCGACCT GGACGGTCAG GCGGCCGCGG CGCTTGCCGA CCGCCACCCC
GCAGCGGTCG TCAACGCCTC ACCATGTCTC AGCGGGCGGT TCCCGGCGCT CGGCGCCGAA
ATTCTGGTGG ACGCCGGCGT GATCCTAATT GATGACACCG GCCCGGACGT CCTTCGCTCG
ATCCGGGACG GACAGCGGAT CTGCCTGCGG GACGGGGAGA TTTTCTCGGC TGCGGACGGC
GAACGGCTGG TCGCCCGGGG CAGGCGCCAC GATGCCGATT CGGTGCGGGC CGCCCGTGCC
GCCGCGGCGG ACGGCCTTGC CGCGCAGCTG GACGCGCTGG TGGCGCAGTC GGCGCAGTTG
CTTCGGGAGC ATGCCGAACT CTTCATCACA CCGGCGCATG GCATCAACCG CGTGATGCCG
AGCCCGCGGA GTGACCCGAT AGCCGGGCGG ATTGCCGAAT GTGACGAGGA ATTCCCCACC
CATCGGCCCG TCGTCGTCGG CTTTGCGAAT ACCCGCTCGG CGGCCGCGGT GCGGCGGGAG
CTTCGCCGGT TGCGCCGCGG CCTGCCGCGA CGCCCCTTTG TCGTCGTGGT TGGGGAGGCG
GTCGACGACC TGCGCGACCT GGCTGAGGCC GCGGACGTCG CAATCGCGCC GGACGATGGC
CCCGGAGTCC GGACGATCGT GCACCGGAGG GTCAGCGTGA CCGACCCCCA TGCCGGCGGC
GATGCCCTGA CGCTTGACCT GCCGATCCGC GACGTCGGAC TCCTGCTTGC CGCCGCGCTC
ACCACGGGAC CGGTCATCAC GATAGGAGCG CCGGGTGATG TCGTTGAACT CCTCGACGAC
GGCGAACCGG CGTCCGCCGT CCTGACCCGG CTGCGTTTGG CAGACCGGCT CGTGAGCAGC
GCGGCGGTCG CCGCGATCGT GAAGTCACGT CGCCGACGGA CGGTGGCCGC GGCGGTGATC
GCGCTGATAG CCGGCGTGGG ACTGGGTCTG GTCAGCGCGC AGCCAACCGT CGACCACGCA
GCCGTGATGG CAGGGCGCGC GGTGACAACC GCGGCCCACG CGGTCGTCCA CGCTGCCGGC
GGCCTGCTGC ACGACCTCCC GTGA
 
Protein sequence
MRLALGFRRR QAEHVGVVGI ARIDRDLRRL AARLQPGDIA VIDQLDLDGQ AAAALADRHP 
AAVVNASPCL SGRFPALGAE ILVDAGVILI DDTGPDVLRS IRDGQRICLR DGEIFSAADG
ERLVARGRRH DADSVRAARA AAADGLAAQL DALVAQSAQL LREHAELFIT PAHGINRVMP
SPRSDPIAGR IAECDEEFPT HRPVVVGFAN TRSAAAVRRE LRRLRRGLPR RPFVVVVGEA
VDDLRDLAEA ADVAIAPDDG PGVRTIVHRR VSVTDPHAGG DALTLDLPIR DVGLLLAAAL
TTGPVITIGA PGDVVELLDD GEPASAVLTR LRLADRLVSS AAVAAIVKSR RRRTVAAAVI
ALIAGVGLGL VSAQPTVDHA AVMAGRAVTT AAHAVVHAAG GLLHDLP