Gene Acel_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1237 
Symbol 
ID4486685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1377179 
End bp1377796 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content66% 
IMG OID639730014 
Productcondensin subunit ScpB 
Protein accessionYP_872995 
Protein GI117928444 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.818774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGGTG GTGCGGCAGG CGACCCGGAA CCGGCCCTGA TCGAGCCGGG CGACGTCTCC 
ACGGGCGACG TGATGGGCGC GGTGGAGGCG ATGCTCTTCG TCGCCGATGA ACCGGTGACC
GTGACGGCGA TGGCTGCGGT TCTTGGTGTG CCGGAACCAC AGGTGGCGGA GGCGGTTGCG
CGACTCGCTG CGTCACTGGC GGACGCCGGC CGTGGCATCG AACTACGCCA GGTGGCCGGT
GGCTGGCGGT TGTACACCCG GCCTGCGTAC GCCGAGGTCG TGCAGCGCTT CCTGCGGGAA
GGTCAGCAGG CACGGTTGAC ACAGGCGGCG CTCGAAACGC TGGCCGTCAT CGCCTATCGG
CAACCGATTT CCCGCTCGCG CGTCAGCGCG GTCCGGGGCG TCAACGTCGA TGGCGTCATT
CGCACCTTGC TCAGCCGCGG ACTCATCGAA GAAGCCGGCA CCGAAGACGG CACCGGCGCC
ACGCTGTATC GCACAACTCG TTATTTCCTT GAGAAACTAG GCATCAACGA CCTCTCGGAG
CTTCCGCCTC TCGCCGACCA TCTCCCTGAA GGCACGTCCA TCGAGGCACT TGAGGAACAA
CTCGCCGGCA ATGAGTAA
 
Protein sequence
MNGGAAGDPE PALIEPGDVS TGDVMGAVEA MLFVADEPVT VTAMAAVLGV PEPQVAEAVA 
RLAASLADAG RGIELRQVAG GWRLYTRPAY AEVVQRFLRE GQQARLTQAA LETLAVIAYR
QPISRSRVSA VRGVNVDGVI RTLLSRGLIE EAGTEDGTGA TLYRTTRYFL EKLGINDLSE
LPPLADHLPE GTSIEALEEQ LAGNE