| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1209 |
|---|
| Symbol | |
|---|
| ID | 4486063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 1348282 |
|---|
| End bp | 1349001 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639729985 |
|---|
| Product | Allergen V5/Tpx-1 family protein |
|---|
| Protein accession | YP_872967 |
|---|
| Protein GI | 117928416 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.15017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCGCC GTCGCCTGCT CGCCCGGTTC GCTCTGACCG CCGCTACGGC GTCCGCATTG
CTCGCCCTGC CGCTGGCTGC GACGAGCCGT GCGGACAGCG CCGGCACTCT GGTCACCCTG
ATCGAGCAGG CCCGCGCCAA CGCGAACCTC CCGCCGCTCG CGGTGCGTTC CGACCTGACC
GCGGCGGCGC AGGCGCAAGC CAATCGCATG GCGGCATCGC ACACCCTGTA CCACACACCG
AACCTCGGAT CGGTGATCTG CTGCTGGCAG AAGATCGGCG AGAACGTCGG CGAGGGCGGC
TCGGTCGTCG TCGTCCACCA GATGTTCATG AGCTCAGCGC CGCATCGAGC GAACATCCTG
GACCCGGCGT TCCGCCAAGT GGGTATCGGC GTGGCAGCCG ACGGCTCCGG CACGCTTTGG
ATCTCAGAGA TCTTCCGGGC ACCGCTCGGC GCGCCCGCGA ACCCCCCTCC GACCTCGCAT
CCGTCCTCTG GACCGGTGAC GTCGGTCGCG CCCGCGGTAG TCGCCGCGCC ACCCGCCACC
CCCGCGCCAC CCGCCACTCC GGCGCGCGTG CCGCCGCACG CCGTCTCTCG GGACGTGCCC
GGCGGACGTC CGGCGCTCGT CGCGGCGCCC TACCTGACCC GGCTGGCGGC GGTCATTGTC
GTCGGCGGCG ACCCGGTCAG CCGGCTCCTC GATTTCGCCC TCCGCGCCGC GCCCTCCTGA
|
|---|
| Protein sequence | MLRRRLLARF ALTAATASAL LALPLAATSR ADSAGTLVTL IEQARANANL PPLAVRSDLT
AAAQAQANRM AASHTLYHTP NLGSVICCWQ KIGENVGEGG SVVVVHQMFM SSAPHRANIL
DPAFRQVGIG VAADGSGTLW ISEIFRAPLG APANPPPTSH PSSGPVTSVA PAVVAAPPAT
PAPPATPARV PPHAVSRDVP GGRPALVAAP YLTRLAAVIV VGGDPVSRLL DFALRAAPS
|
|---|
| |