| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1205 |
|---|
| Symbol | |
|---|
| ID | 4486059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 1342345 |
|---|
| End bp | 1343181 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639729981 |
|---|
| Product | Sec-independent protein translocase TatC |
|---|
| Protein accession | YP_872963 |
|---|
| Protein GI | 117928412 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
|---|
| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0671465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGCC GGCGTGACCC CGAGGGGCGC ATGCCGCTCG GGGAACACCT CCGCGAATTG
CGAGCCCGCA TTCTCAAGAG CCTGCTGGCC ATTCTCGTCG GCGCCGGTGT CTCGTACGCA
TTCTTCAATC CGATCTGGTC GATTCTGCGG CGGCCGTACT GCCAAGTCCA TCAGCCGCAC
AGCATCGCAA CGACCGCAAA CGGCTGCGGC GACCTCGTCT TTTCCAGCGT TTTCGACCCG
ATTATTTGGC ATCTGAAAGT GGCCGCGATC GGCGGCATCC TGCTTGCCTC GCCGATCTGG
CTGTACCAGC TCTGGGCCTT CGTCACACCG GGATTGCACA AAAACGAGCG GCGTTACGCT
TTGCAGTTCG TAGCAACCGC CGTTCCGCTC TTCTGCGGCG GCGCGACCCT CGCGTACTTC
GTGATGTCGA AGGGTCTGCA GGTGCTCCTC AATTTCGCAC CGGCGGGAAC GGTCAGCCTC
ATTTCCATCG ACCATTACCT CACGTACATT CTCGCCATGC TGCTGATTTT CGGCCTGTCG
TTCGACATCC CGCTTCTCGT CGTACTGTTG AACCGGATCG GCATTCTCAG CTACCGGCGA
CTGGCCAAAT CCCGGCGGAT TTCGTATTTC CTGGCGTTTG TCTTCAGCGC GGTGGTCACA
CCGTCGGGGG ATCCGTTCAC GATGCTCGCC CTCGGCGTAC CGCTCGTCGT GCTCCTTGAA
ACCGCCACCC AGATCGCCCG TATTCACGAT GCCCGCAAGG CGCGGGCGCC CGCCGCGACG
GCGTACGCGC ACCTGTCCGA TGATGAGCCG TCGCCGCTGG ATCTCAGCAC CGGTTGA
|
|---|
| Protein sequence | MARRRDPEGR MPLGEHLREL RARILKSLLA ILVGAGVSYA FFNPIWSILR RPYCQVHQPH
SIATTANGCG DLVFSSVFDP IIWHLKVAAI GGILLASPIW LYQLWAFVTP GLHKNERRYA
LQFVATAVPL FCGGATLAYF VMSKGLQVLL NFAPAGTVSL ISIDHYLTYI LAMLLIFGLS
FDIPLLVVLL NRIGILSYRR LAKSRRISYF LAFVFSAVVT PSGDPFTMLA LGVPLVVLLE
TATQIARIHD ARKARAPAAT AYAHLSDDEP SPLDLSTG
|
|---|
| |