Gene Acel_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1195 
Symbol 
ID4485517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1331877 
End bp1333706 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content68% 
IMG OID639729971 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_872953 
Protein GI117928402 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAGATT CCCTGCCGGC CGCGGTAGCG CTGCCCGCCC TCTTCGTGGT CTCCCTCCTG 
TTCGCCGCCT TTGTGGTGGC GGTCGGCGGC CTCCCTGCAG ATGCGGTGAC CGCGGGAGAA
GCGGGGATCG TCGGCTGGTT CTCGTTTCGC AGTCAACCGG CGACCGCGCC GTTGCTCGGA
CTGTTGGGGT GGTTCTTCGC CGCCTCGTTC TCCGCCCAGC CGTTTGCCGC GATTCACCTC
AGCCAAGCGC CCGTCGCGGC CGTCGTCCTG GGCGTGGTGA CCTCCACGGC ATCCGCGGCA
GGAGCTGTGA GGCGCCGGTC CGCATCGAGG GCAACGACGA ACGGGTCTGC CGACAGCGCC
GACGGGGACG CCGGAATACT GGACGACGTG GCAATGGCCC GATCCGCTGG CACACGACGC
CGGCCGCACG CGCTCGCCAG CCTCAGCTGG CGCCGGCAGG TACTCGGCCT GCTTACCAGT
GCCGTCCTGC TCCCGATAGC GACGGTCCTA TTGACGACTA CCGCGCGTCA CGCGCTGGCG
GACGTTGCGC TCGGCTACCT CCTCGTCGTC CTCGTCGTCA CCATGATCGG CGGCGTCTGG
GTCGCGATCG CCGCAGCACT GTCGGCAGGC CTGCTCATCA ACTGGTACTT CAGCCCACCC
GTGCATACCT GGACCATCGA TGCGCCCGAG AACATCGCCA GCATCCTGCT CTTCGTTGCG
GTGGCGCTCT CGGTGAGCTT TCTCGTCCAT CTCTCGGCAC GCCGGGCGCA GCTTGCGGAA
GCGCGCCGTC GGGAAGCAGA TCTGCTGCTG GCGCTTGCGG AGCGGCTGCT GGGCGGGGAC
GACAGTCCGC AGGCAGTGCT CGACGAGCTG GCAAAGGAGA CCGGCAGCCC GGTCGTTCTG
GAGGAGCGCT GCGGCGGCAC GTGGGTCACG GTTGCGAAAG CTGGTTCTGC GGCAGGGGGC
AATGACCCGC AGCACGCGGC GATCCTGCCC GCCGGAGCGG CACTGCGGCT GGTCGTCGGT
GTCAGCGCCG AATCGCCGCC GGATCGGCTG CTTCGGGCGT ACGCGGCGCA AGCCGCGGCG
GCGCTCGAGC GGCAACGCCT CCGCATCCAA GCCTCGCAAG CTGAAGCGCT TGCTGCGGGC
AACCGGATGC GCACCGCGCT GCTTGCGGCC GTGAGTCACG ACTTGCGCAC CCCGCTGGCG
TCGATCAAAG CGGGCGTGAG CACCCTTCGC CAGACCGACA TCCAGTGGTC GCCGTCCGAC
GTCGCGGAAT TGCTGAGTTC GGTCGACCAA GCAACGGATC AGCTCGACGC GCTCATCGCG
AACCTGCTGG ACATGAGCCG AATTCACACG GGTGCCGTGC AACCGTTCCT CCGGCCCACC
GCCCTCGAGG AGGTCGCCCC GCTCGCGCTG GCGGGTTTGG CGGACGCCGA GCGGGTGCAG
CTGGACATTC CCGAGGACCT CCCCCTCATC GCAACCGACC CCGGGCTTCT CGAACGCGTA
CTGGCGAATC TCGTCGCCAA CGCATTGCGT CATTCACCAC CGCACCTCCC CCCTGCGGTC
GTCGCGCGAA TCCGCGGCGA GAAAGTCCGC ATCGATGTCG TCGACCACGG CCCGGGGATA
CCGCCACACG CGCGTGACCG CGTTTTCCAA CCGTTTCAGC AACTCGACGA CCGACGCGGC
GGCGGAGTGG GACTTGGCCT TGCGGTAGCG AGGGGTTTCG TAGAAGCGCT GGGCGGCGAG
ATTCACGTAC TCGAGACGCC GGGAGGCGGT GTCACGATGC GCGTTGAGCT GCCGATATCC
GCTTACGTGC CGAGCGACAT CGACGCATAG
 
Protein sequence
MRDSLPAAVA LPALFVVSLL FAAFVVAVGG LPADAVTAGE AGIVGWFSFR SQPATAPLLG 
LLGWFFAASF SAQPFAAIHL SQAPVAAVVL GVVTSTASAA GAVRRRSASR ATTNGSADSA
DGDAGILDDV AMARSAGTRR RPHALASLSW RRQVLGLLTS AVLLPIATVL LTTTARHALA
DVALGYLLVV LVVTMIGGVW VAIAAALSAG LLINWYFSPP VHTWTIDAPE NIASILLFVA
VALSVSFLVH LSARRAQLAE ARRREADLLL ALAERLLGGD DSPQAVLDEL AKETGSPVVL
EERCGGTWVT VAKAGSAAGG NDPQHAAILP AGAALRLVVG VSAESPPDRL LRAYAAQAAA
ALERQRLRIQ ASQAEALAAG NRMRTALLAA VSHDLRTPLA SIKAGVSTLR QTDIQWSPSD
VAELLSSVDQ ATDQLDALIA NLLDMSRIHT GAVQPFLRPT ALEEVAPLAL AGLADAERVQ
LDIPEDLPLI ATDPGLLERV LANLVANALR HSPPHLPPAV VARIRGEKVR IDVVDHGPGI
PPHARDRVFQ PFQQLDDRRG GGVGLGLAVA RGFVEALGGE IHVLETPGGG VTMRVELPIS
AYVPSDIDA