Gene Acel_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1189 
Symbol 
ID4485511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1322127 
End bp1322831 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID639729965 
Product20S proteasome, A and B subunits 
Protein accessionYP_872947 
Protein GI117928396 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.431495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCC CGTTTTACGT CTCGCCTGAA CAGATCATGA AAGATCGCGC GGAGTTCGCG 
CGGAAGGGAA TCGCGCGGGG CCGCAGCAAC GTGGTCTTGC AGTACGCCGA CGGGATTCTC
TTTGTCGCGG AGAACACCTC GAAAGCGCTG CACAAAATCA GCGAGGTATA CGACCGTATC
GCGTTCGCCG CGGTCGGCCG GTACAACGAA TTCGAGAACC TCCGGGTGGC CGGCGTCCGG
CTCGCCGACC TCACCGGATA CACCTACGAC CGGCGCGATG TCACCGGACG GACCATCGCG
AACGCCTACG CCCAGACCCT CGGGGCGATC TTCAGTGGAG CGACGGAGAA GCCGTACGAA
GTCGAAATCG TCGTTGCCGA GGTGGGCGAT ACGCCGGACG GCGACAGCAT GTACCGGCTG
ACTTATGACG GCTCAGTCGC CGAGGAGCAC GGCTATGTCG CGATGGGCGG CCAAGCCGAA
CAGATCACAG CGCAGCTGAA GGATCGGTAC GTGGAGAACC TGCCGCTCGG TGAGGCGCTG
CGGCTCGCGG TCGATGTGCT CTCCCGAGCC TCGGACGGCG GGGAGCCGCG GACCCTCACC
CCGGACCAGC TGGAGGTCGC CGCGCTCGAC CGGACCCGCG GGCGGCGCGC CTTCCGGCGT
TTCATCGGCG CCCAGCTGCA GGAACTGCTC CGGCCGACTT CGTAG
 
Protein sequence
MSTPFYVSPE QIMKDRAEFA RKGIARGRSN VVLQYADGIL FVAENTSKAL HKISEVYDRI 
AFAAVGRYNE FENLRVAGVR LADLTGYTYD RRDVTGRTIA NAYAQTLGAI FSGATEKPYE
VEIVVAEVGD TPDGDSMYRL TYDGSVAEEH GYVAMGGQAE QITAQLKDRY VENLPLGEAL
RLAVDVLSRA SDGGEPRTLT PDQLEVAALD RTRGRRAFRR FIGAQLQELL RPTS