Gene Acel_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1179 
Symbol 
ID4485067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1312101 
End bp1312862 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content64% 
IMG OID639729955 
ProductABC transporter related 
Protein accessionYP_872937 
Protein GI117928386 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.515909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.937486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGACA CGGCACAGGG TGCTGTTCGT GCGGTTGCCG CTCGAAATCT GACAAAGGTG 
TACGGCGCCG GTGACACCGC GGTCCGGGCG CTCAACGACG TCACGCTCGA ATTCTTCCGC
GGGCAGTTCA GCGCGATCAT GGGCCCGTCG GGTTCCGGAA AATCGACATT GATGCATTGC
CTGGCCGGCT TAGATTCGGT TACGTCCGGT CACGTCTATA TCGGAGATCT CGACATCACG
ACCCTTGATG ACCGGGCCCT AACCCGGTTG CGCCGTGAAT CGATCGGATT TGTTTTCCAG
TCGTTCAATT TGGTGCCGAC CCTGACGGCC CTGGAGAACA TTACGCTGCC GCTGGACATC
GCGCGGCGCA AACCCGACCA GGCCTGGCTC GACAGCCTGA TTGACGCGAT TGGGTTGCGG
GATCGGTTGC GGCACAAGCC GACGGAACTC TCCGGCGGCC AGCAGCAGCG CGTCGCCTGC
GCCCGTGCGT TGGCGGCCAA ACCAGCCGTG GTTTTCGCGG ACGAGCCGAC CGGTAATCTC
GATTCCCGGT CCGCGACCGA GGTGCTCGGG CTGCTCCGCT GGTTCGTCAA AGAACTCGGC
CAGACCATCG TCATGGTCAC CCACGACCCG GCAGCGGCCA GCTATGCCGA CCGCGTCGTG
TTCCTGCGCG ACGGTCAGGT GGTCGGCGAA TTGCCCGCAC CCACGCAGCA GGCCATTCTC
GACCAACTGG CGGTCCTCGA GACGCCGGTG GTGAGCCGCT GA
 
Protein sequence
MDDTAQGAVR AVAARNLTKV YGAGDTAVRA LNDVTLEFFR GQFSAIMGPS GSGKSTLMHC 
LAGLDSVTSG HVYIGDLDIT TLDDRALTRL RRESIGFVFQ SFNLVPTLTA LENITLPLDI
ARRKPDQAWL DSLIDAIGLR DRLRHKPTEL SGGQQQRVAC ARALAAKPAV VFADEPTGNL
DSRSATEVLG LLRWFVKELG QTIVMVTHDP AAASYADRVV FLRDGQVVGE LPAPTQQAIL
DQLAVLETPV VSR