Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1163 |
Symbol | |
ID | 4484507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 1290919 |
End bp | 1291596 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639729938 |
Product | cell wall surface anchor family protein |
Protein accession | YP_872921 |
Protein GI | 117928370 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0024982 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.538302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCAGCTCC GAAGGAGGAC CAGCGTGTTC AAGCTCTCCA TCCTGGCCGG CAATGTGAAA GTTGCGGCGA TTGCAGCCGC CGTCGTTGCC GTAGGGGGTG GCGGTACGGC GGTCACGTTG TACACCGCAT CATCGAACTC GTCCGGTGTC GTGGCCGCCC AGGCGAGCGA CTCAGGGTCG GCATCGGCCT CCGTGTCGCC GTCCGCGACA GCAACGCCGT CGACGTCGGC TTCAGAAACA CCGACGTCAT CGCCCTCGAC CACGCCGAGC GGGTCAGCGA GCCCGACCAG TTCACCGTCG CCGTCCGCGA GTGGGTTTGT GCTGCCAAGT TGTAGTCCCG GTGAGAACCA CGGCTCGTAC GTCTCCGACG TCGCTCACAG CGCGCCGCGC GGCGAACAGG CGCACGAGAG TGGTGAGCCG AACCATGGTT CGTGGGTGTC GCAAGCCGCT CATTCCGAGT GCGGCTTCGC TGAGGCATCG GAGCATGCGT CGGAGAGCGC CGAACCCAGC GAATCAGAGA GCCCCGAGCC GAGTGAGTCC GCAGAGGAAA CCGAATCAGC CGAGCCCGAA GCATCGGCCG GAGCCGAGAT TGGCGTCTGT GCATCACTGG GCGTCGGGTC TGATCACGGA TCGCACCACG GTCATGGCGA CGAGCAAGCC TGTGGCGGAG GCGACTGA
|
Protein sequence | MQLRRRTSVF KLSILAGNVK VAAIAAAVVA VGGGGTAVTL YTASSNSSGV VAAQASDSGS ASASVSPSAT ATPSTSASET PTSSPSTTPS GSASPTSSPS PSASGFVLPS CSPGENHGSY VSDVAHSAPR GEQAHESGEP NHGSWVSQAA HSECGFAEAS EHASESAEPS ESESPEPSES AEETESAEPE ASAGAEIGVC ASLGVGSDHG SHHGHGDEQA CGGGD
|
| |