Gene Acel_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1160 
Symbol 
ID4484504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1286625 
End bp1287539 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID639729935 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_872918 
Protein GI117928367 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.542606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.44269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCG ATCCGTCGCT GTTGCAGCGT CCGCACAGGC TCGATCCCGC CCCCGCCAGG 
CCCGGACCCG TGGTGCGGCA TCATGCGGGC GTGGCAGAGG TCGTCCCGAT CTACGATCCC
CAGGATCCGC GGCTCGCCGA TTACCGGGCG CTGACCGACG TCGAGCTGCG CAAACGGGTT
GAACCAGCGC ACGGAATCTT CATCGCCGAG AGTGCTCTGG TCATCCAGCG GGCGCTGGCC
GCCGGGTATC GGATGATCTC CGCGTTCGTC TCCGACCGCT GGCTGGATGA GCTTGCCGAC
CAGTTGTCCA GCGTCGAGGC GCCGGTGTAC GTCGGCGCTC CAGAGGTGCT GCAATCGGTG
ACCGGCTTTC ACGTCCACCG AGGAGCCCTT GCCGCATTCG CTCGGCGTCC GCTTTCGTCG
GTCGAGGAGA TCCTGCGCAC GTCGCGGCGG ATCGTCGTCC TTGAAGACGT CAACAACCAC
ACGAACCTCG GCGCCGTCTT CCGGTGCGCG GCTGCGCTCG GCATGGACGG CGTGCTGCTG
AGCCCCCGAT GCGCGGATCC GTTGTATCGG CGCAGTGTCC GGGTGTCGAT GGGCGCGGTC
TTCGCGATCC CGTACGCGCG CTTCGACACT TGGCCTGATG AGCTGACCGG CGTCTCCGCT
GCTCAGTTCC GTCTGCTTGC CCTGACCCCT GATCCGGCCG CAACCGACAT CCGGACCCTT
CGGGTTGCGG CCGGTGAGCG GATCGCCCTA ATGCTCGGTG CTGAAGGCCC GGGGCTGTCG
AAACAGGCAC TCGACCGGGC GGAGCTGCGG GTCCGCATTC CCATGCACGC CGGGGTGGAC
TCGCTCAACG TTGCGGCAGC CGCGGCGATC GCGTGTTTTG TGGTCGGCGA GCCGGCGCCG
CCACGGCTCG ACTAA
 
Protein sequence
MDADPSLLQR PHRLDPAPAR PGPVVRHHAG VAEVVPIYDP QDPRLADYRA LTDVELRKRV 
EPAHGIFIAE SALVIQRALA AGYRMISAFV SDRWLDELAD QLSSVEAPVY VGAPEVLQSV
TGFHVHRGAL AAFARRPLSS VEEILRTSRR IVVLEDVNNH TNLGAVFRCA AALGMDGVLL
SPRCADPLYR RSVRVSMGAV FAIPYARFDT WPDELTGVSA AQFRLLALTP DPAATDIRTL
RVAAGERIAL MLGAEGPGLS KQALDRAELR VRIPMHAGVD SLNVAAAAAI ACFVVGEPAP
PRLD