Gene Acel_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1157 
Symbol 
ID4484501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1283876 
End bp1285078 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content69% 
IMG OID639729932 
Productlytic transglycosylase, catalytic 
Protein accessionYP_872915 
Protein GI117928364 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.798233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.63367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCCG CGGCCGGGCG GCGGTTTGCG CCGACAGCGT CGGCGTCCGG GTCGCGAGCG 
CCGGCGGACG GCGTCCGGTG TGGCGTCAAG GCATCCCGGA TCAACGCCGA CGTTGCCTAC
GTGCCGATTG GCGGGGAGCT GGGTCATCGT GCGAGGCGCT GGCTTGCAAC CGGCGCCTGC
GTCCTTGCCC TTTCCCCGCT CCTCGTTCCG ACCGCGGCGG ACGCCGAATC AGCCGCTCAA
GCGCAACGGG AGGCGGCAGC CATTGCCGCT CAGGTGCAGG CGCTGCAGCC GCAGGTGACA
GCTGCTTTGG CGGCGTACGA AGCCGCCCTT GACGGAGTGG CCCGCAGCGT CTCAGCGACT
GTGGCGGACC GCAGGGTGTA TGAGGCTCTC CAGGCGCAAG CGGACCAGGC CGCCGCTACG
TACGCCGCCG GGATAGCCGC GCTTTACGAA GCAGGCGGAC CGCTCGGCAT CTACGCCGCC
TTGCTGACCA CCGGTGTACC CCCGGATCTG CGGCATCTCC CTTATGTGTC AGGCGTGTTG
AGCCGGCAGG CGGCATGGGC CGAGACGACC CGCCAATTTG CGTCCGCGGC CAAGCAGCGG
TTGGACGCCG ATGAGGCTTC CATCGACACT GAGCTCGACA ATGCGGCCAC CATTCAGCAG
CGCTACCTCG TTCTGCAGGG ATTGCTCGAT CGTGCGCAGG CCATTCTCGA TGCGGCAACC
GCCCGGGCCC GCGCGCTTGC CGCGTGGGAG TCCGCCGCGG CGGCTCTTGC CGCCGTCCGG
GTCGCCGCGG ACCAGGCCGG CGTCGATGCG GCCGCGAATG CCGTTGCTGA ACCGATACCG
GACGCGTACC GCGCCTGGTA TCAGGCCGCT GCCAAGACCT GCCCGGGACT ACCGTGGCAG
GTGCTTGCGG CGATCGGGCA GGTCGAGAGC CATCACGGCC AAGGCACGAT GGTTTCCGCC
GCGGGTGCGC TGGGTCCGAT GCAATTCCTC CCGGCCACCT TCGCGCGGTA TGCCACCGAC
GGAAACGGCG ATGGCAAGGC CGACATCTGG AATCCGGCCG ATGCCATCTT CACCGCCGCC
CGCTACCTCT GTGCGAACGG CGCCGGACAA GGCGAGGCGG GACTGCAGGC CGCACTGTGG
AATTACAACC ACGCGGAGTG GTACGTCCAG CTCGTGTTGG CGATTGCCGC GAAAATACGT
TGA
 
Protein sequence
MDAAAGRRFA PTASASGSRA PADGVRCGVK ASRINADVAY VPIGGELGHR ARRWLATGAC 
VLALSPLLVP TAADAESAAQ AQREAAAIAA QVQALQPQVT AALAAYEAAL DGVARSVSAT
VADRRVYEAL QAQADQAAAT YAAGIAALYE AGGPLGIYAA LLTTGVPPDL RHLPYVSGVL
SRQAAWAETT RQFASAAKQR LDADEASIDT ELDNAATIQQ RYLVLQGLLD RAQAILDAAT
ARARALAAWE SAAAALAAVR VAADQAGVDA AANAVAEPIP DAYRAWYQAA AKTCPGLPWQ
VLAAIGQVES HHGQGTMVSA AGALGPMQFL PATFARYATD GNGDGKADIW NPADAIFTAA
RYLCANGAGQ GEAGLQAALW NYNHAEWYVQ LVLAIAAKIR