Gene Acel_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1139 
Symbol 
ID4484627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1267377 
End bp1267850 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content64% 
IMG OID639729914 
ProductNifU family SUF system FeS assembly protein 
Protein accessionYP_872897 
Protein GI117928346 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01994] SUF system FeS assembly protein, NifU family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.039211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCG AGGCCATGTA CCAGGAGATC ATCCTGGACC ACTACCGCAA TCCGCATCAC 
CGTGGGTTGC GCGAGCCGTA CGACGTCGAG GTCCATCACG TGAACCCGAC CTGCGGCGAC
GAAGTGACCC TGCGGGTCAA GCTCGACGGG CCAAAGATCG TGGATGTCTC GTACGAGAGC
ATCGGATGCT CCATCAGCCA GGCGGCCGCC TCCGTCCTCG CCGATCTCAT GATCGGAAGT
GAGGTGCAGG ACGGGCTGGC GGTGCACCAG GCCTTTCTCG AGCTCATGCA ATCCAAGGGC
GCCGGGCAGG CCGACGAGCA GCTCCTCGGT GATGCGGTCG CCTTTGCCGG CGTGGCCAAG
TACCCCGCCC GCGTGAAGTG CGCGCTGTTG TCCTGGATGG CGTGGAAGGA CGCTACGCTG
CAAGCGATGA GCCGGGCGGA CGAAGGTTCG GCCAGCAGCG AAATTCCTGG ATGA
 
Protein sequence
MDLEAMYQEI ILDHYRNPHH RGLREPYDVE VHHVNPTCGD EVTLRVKLDG PKIVDVSYES 
IGCSISQAAA SVLADLMIGS EVQDGLAVHQ AFLELMQSKG AGQADEQLLG DAVAFAGVAK
YPARVKCALL SWMAWKDATL QAMSRADEGS ASSEIPG