Gene Acel_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1136 
Symbol 
ID4484624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1264075 
End bp1265298 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content68% 
IMG OID639729911 
ProductFeS assembly protein SufD 
Protein accessionYP_872894 
Protein GI117928343 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01981] FeS assembly protein SufD, group 1 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0309349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGC GCACGAACAT GCTAGAAACC GCCGAGCTCT CCGAGCTCGA ACGCGGACGG 
ATCGACGTCG ACGACGCGCC GGTCCATCCG CAGCCGCACA GCCACGGTCT CCAAGGCGGC
CGGCACCTTG AGCGGACGTT CTCCTTTGAC CCGGCGGACT TTCCGGAGCC GGACAGTCAC
CAGGAGCTCT GGCGGTTCGC CGCGCTTCCC CGCCTCCGGC CGCTGTTTGC GGGCCCGCCG
GCGACGGGAA CCGTCGACGT CAGCTGGCCT GACGCAGCGC CGGTCCAGAC GGTGCCGATG
ACGGATCCGA GGCTCGACGT CGTCCACACG CCGTTCGACC GGATATCCGC GGTGGCCCGG
CAGCGGGTCA CCGAGGCTTT AGTCGTCGAC ATCGGTGACA CGGCGGCCGA GCCGGTCACT
CTCGCCGCCA AAGGCACGGG CGGGGTGAGC TACGGGCATT TGCTCGTCAC GACCCGTCCC
GGGAGCGCCG GCACTGTGGT CCTTGACCAC AGGGGGAGCG GCACCTACGC AGCAAACGTC
GAGCTCGATG TCGCCGACGG GTCAAGCCTG ACGTTCGTCA CCATCCAGGA TTGGGACGAC
GACGCCATTC ACGTCGCCGC GCACTCGGCC CGGATTGGCC GGGACGCCCG ATTGCGGCAC
ATCAACGTGA GCTTCGGCGG TTCGGCCGTG CGCATTTCAC CCCTCGTCAC GTTCGCCGCG
CCGGGCGGCG ATGCGGAATT GCTCGGTGTC TTCTTCGCCG ACGCCGGCCA ACACATCGAC
GCACGGCTCA TGGTCGACCA TTCGGCGCCG AATTGCCGGA GCCGGGTGAA TTACCGCGGT
GCGCTGCAAG GAGAGAAGGC GCGGACCGTC TGGGTCGGTG ACGTCATCAT CCGCCCGCAA
GCCGTGGGTA CGGACACCTA CGAGGCCAAC CGCAACCTTC TGCTCACCGA CGGCGCCCGA
GCCGACTCGG TGCCGAATCT GGAAATCCTC ACCGGCGAGG TCATCGGAGC CGGCCACGCG
AGTGCGACCG GACGGTTGGA CGACGAACAG CTCTTCTACC TGCAGGCCCG TGGTATTCCG
CGTGATCAGG CGCGCCGGCT CATTGTGCGG GGCTTCTTCG CCGACGTCAT CGAGGACATC
GGCATCCCGG AGTTGGTGAC CCGGCTGCTC GCCCATGTCG ACCGGGAGCT GGAATTGACC
GAGCTCACGG CGGTCAACCG ATGA
 
Protein sequence
MTERTNMLET AELSELERGR IDVDDAPVHP QPHSHGLQGG RHLERTFSFD PADFPEPDSH 
QELWRFAALP RLRPLFAGPP ATGTVDVSWP DAAPVQTVPM TDPRLDVVHT PFDRISAVAR
QRVTEALVVD IGDTAAEPVT LAAKGTGGVS YGHLLVTTRP GSAGTVVLDH RGSGTYAANV
ELDVADGSSL TFVTIQDWDD DAIHVAAHSA RIGRDARLRH INVSFGGSAV RISPLVTFAA
PGGDAELLGV FFADAGQHID ARLMVDHSAP NCRSRVNYRG ALQGEKARTV WVGDVIIRPQ
AVGTDTYEAN RNLLLTDGAR ADSVPNLEIL TGEVIGAGHA SATGRLDDEQ LFYLQARGIP
RDQARRLIVR GFFADVIEDI GIPELVTRLL AHVDRELELT ELTAVNR