Gene Acel_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1133 
Symbol 
ID4485189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1260619 
End bp1261731 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content70% 
IMG OID639729908 
Productcytochrome oxidase assembly 
Protein accessionYP_872891 
Protein GI117928340 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1612] Uncharacterized protein required for cytochrome oxidase assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0340852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCGG CAACGATACG TGCCCGCCTC CGGTCGTGGC GGGCAACACC TCAGGTGGTG 
CGCCGGTGCA CCGCAGCGGC GCTGGTCGCG AACGTCGCGA TTGTGGGCAC CGGCGGTCTG
GTCCGACTCA CCGGCTCCGG CCTGGGGTGC CCATCATGGC CGGACTGCGC GCCGTCGTCG
TTGGTCCCGA CGCCTGAGCT CTCGTGGCAC AAGTACGTCG AATTCGGGAA CCGGCTGTTC
ACCTACGTCG TCTTGGCAGC CGCGGTCGCA GCACTCGTCG CCGTTTACCG GGCCGCACCG
GAGCGCCGTG ACCTGCGACC GTGGGCGTGG GCCACGCTCC TCGGCATTCC GGCGCAGGCC
GTGCTTGGCG GTATCACCGT TCTGACCGAC CTCAACCCGT GGGCGGTTGC GGCGCATTTC
TTGCTCTCGA TGGGCGTTGT CGCCACCGCG ACGGTGGCCT GGTTTCGATC GCTTCCACCG
GCAGCCACCG GTGCGCCGCC GGTAGCTCTC CGGCGGGCCG GGCAGGCCCT CCTTGCCCTG
ACCTTCGCGG TCTGCGCAGC CGGCACCACC GTGACGGGTG CCGGTCCGCA TGCGGGCGAT
CCTCGGGCCG CCCGGATACC GGCGCGACCT GCCTCGCTGG CGCAGCTCCA CGCGGATCTC
GCCATGCTCC TCGTCGGCCT CGCGGTGGGT CTGGCGGTCA CCGCAACCGT CATGGACGTC
GGACGACGAA CGATCCGCGC GACGCGCTGG ATGGTCGTCC TCCTTGCGGT CCAAGCGGTC
ATCGGCTGGA CCCAGTACTT CCTCGGCTTG CCTGCGGGGT TGGTCGAAAT TCACATGCTG
GGCGCTGCGT CTCTTGTCGT CGGGGCCACC TGCGTCAGCG CGTCCCTGTC CCGGCCCGGC
CGTCGGATCG ACGTCGCACG GAACCCCGAC GGCACGCGGG ACTACGTACC GGACAACATG
CCGAGCGACG TACCGGGCGA CGTCGCGAAC GACCTGCCGG AGATCGGCGG GCCGAAGCCC
GTTCCCGCCC AGGTAACCGC TCTCACACCC GCCGGGAGCG ACAAAACACC TCAAAAGCCA
CCGGCCGCTA ACCCGGCTGT CACGTCTCGG TAA
 
Protein sequence
MPAATIRARL RSWRATPQVV RRCTAAALVA NVAIVGTGGL VRLTGSGLGC PSWPDCAPSS 
LVPTPELSWH KYVEFGNRLF TYVVLAAAVA ALVAVYRAAP ERRDLRPWAW ATLLGIPAQA
VLGGITVLTD LNPWAVAAHF LLSMGVVATA TVAWFRSLPP AATGAPPVAL RRAGQALLAL
TFAVCAAGTT VTGAGPHAGD PRAARIPARP ASLAQLHADL AMLLVGLAVG LAVTATVMDV
GRRTIRATRW MVVLLAVQAV IGWTQYFLGL PAGLVEIHML GAASLVVGAT CVSASLSRPG
RRIDVARNPD GTRDYVPDNM PSDVPGDVAN DLPEIGGPKP VPAQVTALTP AGSDKTPQKP
PAANPAVTSR