Gene Acel_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1131 
Symbol 
ID4485187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1258326 
End bp1259111 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content64% 
IMG OID639729906 
ProductABC transporter related 
Protein accessionYP_872889 
Protein GI117928338 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0806733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAAT CCCCCATCCT CGCCCTTCGG GGCATCAATA AGAGTTTCGG CGCGGTCCAC 
GTGCTCCGCG ACGTGGACTT CAATGTCTAT CCCGGCGAGG TCATGGCGCT CGTCGGCGAC
AACGGCGCAG GAAAGAGCAC TCTGATTAAG TGTATTGCCG GTATCTATCC GGTCGACAGC
GGCGAGTTTT ACTTTGCCGG TAAGCAGATT CATATTCATG GCCCGCGGGA TGCCGCCGCG
TACGGCATCG AATTCGTGTA CCAGGACCTC GCCCTCTGCG ACAACCTCGA CATCGTGCAG
AACATGTTCC TTGGCCGGGA GCTTCGGACC CGACCATTGC ATGCCCTTGA CGAAGGAACC
ATGGAGCGCC GGGCCCGGGA AACCCTCGCG AGCCTCTCGG TGCGCACCAT CCAATCCGTC
CGCCAGGTCG TCTCGAGCCT CTCCGGCGGC CAGCGCCAGA CCGTCGCGAT CGCCAAGGCG
GTCCTGTGGG AAAACAAAGT CATCGTGCTC GACGAACCGA CCGCCGCGCT CGGCGTCGCG
CAGACCAAAC AGGTCCTCGA TTTGGTGCGG CGGCTTGCCG ACTCCGGGCA CGGCGTCGTC
CTCATCTCGC ACAACATGAA CGACGTGATG CAGGTGGCGG ACCGGATCAC GGCGATGTAC
CTCGGCCGGG TCGCCGCCGA GGTGTCCGCC TCCGACGTCA CGCACGCACA AGTCGTCGAG
CTCATTACCG CCGGGCGCAG CGGAAACCTT GGCCTCCAGC CGGCCGAAGC TGCGCAGAGC
GCTTGA
 
Protein sequence
MSESPILALR GINKSFGAVH VLRDVDFNVY PGEVMALVGD NGAGKSTLIK CIAGIYPVDS 
GEFYFAGKQI HIHGPRDAAA YGIEFVYQDL ALCDNLDIVQ NMFLGRELRT RPLHALDEGT
MERRARETLA SLSVRTIQSV RQVVSSLSGG QRQTVAIAKA VLWENKVIVL DEPTAALGVA
QTKQVLDLVR RLADSGHGVV LISHNMNDVM QVADRITAMY LGRVAAEVSA SDVTHAQVVE
LITAGRSGNL GLQPAEAAQS A