Gene Acel_1129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1129 
Symbol 
ID4485185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1255502 
End bp1256812 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content68% 
IMG OID639729904 
ProductROK family protein 
Protein accessionYP_872887 
Protein GI117928336 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0571556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGGCG TCGCCACCCA AGACGTCATC CGACAGCGCA ACTTGTCTGT GCTGCTTCGC 
CGCTTGCACG TTGACGGCGC ATTGTCCCGA GCCGATCTGA CTGCCGCCAT GGGGCTCAAC
CGCTCCACCA TCAAGGCACT CGTCGAAGAG CTTGCGGCGA TGAACCTGGT GACGGAGACA
ATTCCGGGGA CCGCGCAGCG CGCCGGCCGG CCGTCGCATG TGGTTGCCGT CCGATGTGAC
ACGGCGTACG TGCTGGCCGC GAATGTCGGC GTCGATACCG TGACGGTTGC CGCCTTTGGT
TTAGGCGGGC ACATCTTGGC ACGCCGCGAC TACCCCCTTG GTGGGCCGGG CGCAAGCGCC
GATGCGGTGA TTGCGCGGCT CGCCGCGGAA TGTGCGGCAA TTCGCTCGGC GTTGGAGCGC
TCGCCGGATC GGCGGTTGGT CGGCATCGGG GTTGCGATTC CCGGCATGGT TCACGCCGAG
GACGGGCGGG TGGAATTCGC GCCCAACCTC ATGTGGCGGA ACGTCCCGTT CGCCGCTCCG
CTCTCCGCGG CGTTGGACGT CGACGTCCCG ATTCGCATCG GCAACGACGG CGACCTTGGC
GCGCTCGCCG AACAGGTGCG CGGCGCCGGC CGTGGCGTCG CCCATCTTGT CTACATCGCC
GGTGAAGTAG GTATTGGCGG CGGCATCATC GTTGACGGCC GGCTCGTTCT CGGCCGGCAC
GGCTTCGCTG GGGAAATCGG GCATGTCATG GTGCATCCAG ACGGACGTCC GTGCCGATGC
GGTGGCCGCG GCTGTCTTGA GACCGAGGTC GGTGAGGAGG CGATCCTGAC CGCGTGCGGC
CGGGATCCGC GGGCGGGCCG CCAGGCAACC CACGAGGTCT TCGAAGCCGC CCGGCGTGGA
GATCGCCGTG CGCAGGACGG CCTGCGGCAC ATCGCGGTCT GGCTCGGCCG GGGGCTGGGC
AGCATCATCA ATGTCTTCGA CCCGGAAGTG GTCATTATCG GAGGCCCGCT GTCGTCCCTG
CTGCCGCTTG CTGAACCGGT CATCCGCGAA GAACTCGCGG CCTCAACGCT GCCCCATCGT
CGCAGTGTGC AAATCCGCCC GCCCGGTCTC GGTGAGGACT CCAGCCTCTT CGGGGCAGCG
GAACTCGCCT TCGAACGGTT GTTGGAAGAC CCGTCGATGA TGGGCGAAGG GGCGGCCCGC
GTTCGGTTGG CGGCAGAGGA TTCGGCTACG GCCGATGCGG TCGTCGAGGA TTTGGCTACG
GCAGATACGG CGCCAACGCG ACCGCGACAA AGAGCAGTGT CAGGTAGCTG A
 
Protein sequence
MPGVATQDVI RQRNLSVLLR RLHVDGALSR ADLTAAMGLN RSTIKALVEE LAAMNLVTET 
IPGTAQRAGR PSHVVAVRCD TAYVLAANVG VDTVTVAAFG LGGHILARRD YPLGGPGASA
DAVIARLAAE CAAIRSALER SPDRRLVGIG VAIPGMVHAE DGRVEFAPNL MWRNVPFAAP
LSAALDVDVP IRIGNDGDLG ALAEQVRGAG RGVAHLVYIA GEVGIGGGII VDGRLVLGRH
GFAGEIGHVM VHPDGRPCRC GGRGCLETEV GEEAILTACG RDPRAGRQAT HEVFEAARRG
DRRAQDGLRH IAVWLGRGLG SIINVFDPEV VIIGGPLSSL LPLAEPVIRE ELAASTLPHR
RSVQIRPPGL GEDSSLFGAA ELAFERLLED PSMMGEGAAR VRLAAEDSAT ADAVVEDLAT
ADTAPTRPRQ RAVSGS