Gene Acel_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1128 
Symbol 
ID4485184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1254634 
End bp1255557 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content66% 
IMG OID639729903 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_872886 
Protein GI117928335 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) 
TIGRFAM ID[TIGR01473] protoheme IX farnesyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0340852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGC TCGCGCCTTC CTCAACACCG CTGCCTGCCG GGCGGCGCGG TGCCGTCGAC 
ATCGTCAAAG GACTGATTGC GCTCACTAAG CCGCGGATTA TCGAGCTCCT GCTTGTGACG
ACCGTGCCGA CCATGATGCT CGCCGCCCGG GGATGGCCGT CCTCCCGGCT GGTGGTGGTC
ACCGTGTTGG CGGGGGCGCT CGCCGCGGGA AGCGCCAACA CGCTGAACTG CTTCATCGAC
CGCGATATCG ATCAGGTGAT GCGCCGGACC GCCCGGCGTC CGTTGGTGCG ATCCGTGATC
CGGCCCGCTG AAGCGCTGGC TTTTGGCGTG GCGTTGGGAG TCGTCGCCAC CCTGCTGATG
GGATTTCTGG TGAATTGGCT GTCGGCGATC CTGGCCGATG CGGCCATCGT TTTTTACGTC
GGCGTGTACA CCATCGGCTT GAAACGCCGG ACTCCGTCGA ACATCGTTAT TGGCGGCGCC
GCCGGATGCT TTCCCGTGCT CATCGGGTGG TCCGCGGTGA CCGGCCGGGT GGGCTGGCCG
GCGGTCGTGC TCTTTGCGGT CATCTTTGCG TGGACACCGC CGCATTTCTG GGCGTTGGCC
ATGCGTTTCC GGGAGGATTA CGCCGCCGCG CACGTCCCGA TGCTTCCCGT CGTCGCCGAG
CCGCTGGTCG TCGCCCGGCA GATTCTCTGG TACTCCTACG GAATGGTGGC GGCTTCGCTG
GCGCTTGCTC CCGTCGCGCA CGTGGGATGG GTGTACGTCG CCATTGCCGC CCTCCTCGGT
GGGTGGTTCC TTGCCGAGGC CCACCGCATC GTCCAGCGGG TCAGGCTGGG GCGTGACCCT
CGGCCGATGC GGCTCTTCCA CATGTCCATC AGCTACCTGA CACTGCTCTT TGTCGCGGTC
GCGTTGGCGC CGTATCTGCC GTAG
 
Protein sequence
MTALAPSSTP LPAGRRGAVD IVKGLIALTK PRIIELLLVT TVPTMMLAAR GWPSSRLVVV 
TVLAGALAAG SANTLNCFID RDIDQVMRRT ARRPLVRSVI RPAEALAFGV ALGVVATLLM
GFLVNWLSAI LADAAIVFYV GVYTIGLKRR TPSNIVIGGA AGCFPVLIGW SAVTGRVGWP
AVVLFAVIFA WTPPHFWALA MRFREDYAAA HVPMLPVVAE PLVVARQILW YSYGMVAASL
ALAPVAHVGW VYVAIAALLG GWFLAEAHRI VQRVRLGRDP RPMRLFHMSI SYLTLLFVAV
ALAPYLP